Brachypodium distachyon (stiff brome): 100839501
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Entry
100839501 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100839501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100839501
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100839501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_4
RRM_5
zf-CCHC_3
zf-CCHC_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100839501
NCBI-ProteinID:
XP_010231673
UniProt:
I1HLH5
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All DBs
Position
2:34536469..34540877
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AA seq
310 aa
AA seq
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MPRYDDRYDRYGDRYDRYDDRYDRYSDRYDRYDRYGDNTKLYVGRLSTRTRTQDVEYLFG
RYGRVRNVELKHDYGFVEFSDPRDADDARYELDGRDFDGSRIIVEFAKGTPRGPGGSFNY
VGRSLPPGSGRCFNCGIEGHWARDCKAGNWKNKCYRCGEMGHIEKNCQNSPKNLKRGGRY
SRSPSPQRGRSRSRSYSRGHKGYSQSPSPRRDVLEEMPSPRRDDRGAGLKERRPISSSYS
PRRSASPSGCNRSPTSNGMSHPPRKQAEGNGSHHSARGDSQSPAHDRRPATNGRGLAPEH
DGKSGVPPGT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtacgatgatcgttatgatcggtacggtgaccgttacgatcggtacgatgat
cgttatgatcggtacagtgaccgttacgaccggtatgatagatacggcgacaacaccaag
ttgtatgtgggccgcctttctacacgcacccgtacacaggatgttgagtacctcttcggc
agatatggaagggtgcgaaatgtggagctgaagcatgattatggatttgttgagtttagc
gatccccgtgatgcagatgatgcaaggtatgaacttgatggccgagattttgatgggagc
cgcatcattgttgagtttgccaaagggaccccgcgtggtccaggaggttccttcaattac
gtgggcaggagcctccctcctggttctggccgttgctttaactgtgggatcgaaggccac
tgggctcgtgattgcaaagccgggaactggaaaaataagtgctaccgctgtggagaaatg
ggccatattgaaaaaaactgccagaacagtcctaagaatctcaagcgagggggacgctac
tcaaggtccccatcacctcagcgtggaaggagccgaagcaggagttacagcaggggccac
aagggttacagtcaatcgccttctccaaggagggatgtccttgaggaaatgccttctcca
aggagggatgatcgtggcgctggtctcaaggaaaggcggccaataagctccagttacagt
cctaggaggagtgcttcaccttcaggttgcaaccgtagcccaacatcgaatggcatgagc
cacccaccaaggaagcaagctgaaggcaacggatcgcatcacagtgcgagaggcgacagc
cagagcccagcccatgacaggcgcccagccaccaatgggcggggcttggcccctgagcat
gatggcaaatctggtgtgccacctggaacttga
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