Brachypodium distachyon (stiff brome): 100839516
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Entry
100839516 CDS
T01717
Name
(RefSeq) DNA topoisomerase 2 isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdi03032
]
100839516
03036 Chromosome and associated proteins [BR:
bdi03036
]
100839516
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
100839516
DNA replication proteins [BR:
bdi03032
]
Eukaryotic type
DNA Topoisomerases
100839516
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
100839516
Centrosome formation proteins
Centriole proteins
100839516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100839516
NCBI-ProteinID:
XP_003570162
UniProt:
I1ICW6
LinkDB
All DBs
Position
3:complement(53118182..53125270)
Genome browser
AA seq
1494 aa
AA seq
DB search
MAAAAKKPPLKSSSSHNSVAGGGAGKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTQPLW
VYDDGAMVHRPVTYVPGLYKIFDEILVNAADNKQRDPKMDSLRVFIDVEGCCVSVYNNGD
GIPVEIHQAEGVYVPEMIFGHLLTSSNYNDNEQKTTGGRNGYGAKLTNIFSTEFTIETAD
GHRQKKYKQVFSENMGKKSEPEISKCKQSENWTRVTFKPDLAKFNMAHLEDDVVALMKKR
VVDMAGTLGKTVKVELNGQKVPAKSFLEYVNLYIDSASKDGVKLPSIYQKVNDRWEVCVS
LSEGQFQQVSFVNGIATIRGGTHVDYVANQIATHVMAVVNKKNKQANMKLHTVKGYLWVF
VNALIDNPAFDSQTKETLTTRQGSFGSKCDLSDDFLKKVADSGVVSNLLSWADFKLSKEL
KKTDGSKRSNVLGIPKLEDANDAGGRDSDKCTLILTEGDSAKALAMAGRGIVGNDHYGVF
PLRGKLLNVREATHKQMMENAEIQNIKKIIGLQHGKEYNSTKDLRYGHLMIMTDQDHDGS
HIKGLLINFIHSSWPSLLKVPSFLVEFITPIIKATNKRSKSVISFYSMPDYEAWKERLGA
NASAWSIKYYKGLGTSTADEGREYFEKIAHHRKDFVWADDKDGDAIELAFSKKRIADRKD
WLSNYQPGTCLDQREKRIKYSDFINKELILFSMADLERSIPSMVDGLKPGQRKILFSSFK
RNLVKEIKVAQFIGYVSEHSAYHHGEQSLASTILGMAQDYVGSNNISLLEPRGQFGTRNS
GGKDAASARYIYTRLPSITRIIFPKDDDVLLNYLNEDGQSIEPTWYMPIIPMVLVNGSEG
IGTGWSTYTPNYNPRDIVANLKRLLNDDPIVPMDPWYKGFKGSFEKTTTKAAGVTYTISG
IIEAANDTKLIISELPVRRWTLDYKEFLLSMCPQSVKEKEKEKDKNKNKSKDKDKDKDKN
KEKEPPFLEDLRSQCDDSSVYFELTLSEKNMAIAMQEGLEKKFKLTNTMGTTNMHLFDSN
GKIRKYDTPEEILQEFFTLRLEFYGRRKITMLKNMRVELLKLENRVRFIRSVISGDIKVN
NRKRAELFLELKEKNFDAFPKKKNKTEPVAVGAEEEDEENEESPAEDTDGVLGGDYEYLL
SMAIGTLTLEKVKQLIAQKDNLVNEVERLSKTDPKSLWVKDLDALEKELDVLDAELKAAE
EKRRLAREKSTKDGKASKAAPKRQPKKTAAKSQKANLAGSDDEDYVAAIPKPAAQKKKPA
KKASAQVKDAEDEILELKDRLAASNLDSSPEHIDMETETTEGPEKGKKGVDEPSNRGAAK
KAMSSLADWSDEEDLTAPIHESEDEGFAMEEVQVEKKTRGRKPAAEKSKPAVRKRAPAQS
KGMRQKVMEEIFKPTDDSTTSAPSPVKKVRKMRASPFNKKSGSVFQRVAGASTGTEDTDA
PQSGSSAEPVAPRRTARERKAKAIYIDSASDNDDSEDEDVQDLSDESDFDEDED
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccaagaagcccccgctcaagtccagctcctcgcacaactccgtcgcg
ggcggcggcgccgggaagaccatcgaggagatgtaccagaagaagacgcagctggagcac
atcctcctgcggccggacacgtacatcggctcggtggagaagcacacgcagccgctgtgg
gtctacgatgacggcgccatggtgcaccggcctgtcacctacgtccccggcctctacaag
atcttcgacgagatcctcgtcaacgccgccgacaacaaacagcgcgaccccaaaatggac
tccctccgggtctttatcgacgtcgagggctgttgtgtctccgtatacaacaacggagac
ggcatacccgtcgagatccaccaggcggagggcgtctacgtgccggagatgatctttggc
cacctcctcactagcagcaactacaacgacaacgagcagaagacaacaggagggaggaac
ggctacggtgccaaactcaccaacatcttctcgacggagttcacgatcgagacagctgat
gggcaccggcaaaagaagtacaagcaggttttctctgaaaacatggggaagaagtcggag
cctgagatttcaaagtgcaagcagtcagagaactggaccagagttactttcaagcccgac
cttgcgaaatttaacatggcccatctggaagatgatgtcgtggcactcatgaagaagcga
gtagttgatatggcaggaacccttggcaaaaccgtgaaggttgagttaaatggccagaaa
gtgccagcaaagagcttcttggaatatgtgaatttgtatatagactcggcttccaaagat
ggagtcaagctccccagtatttaccaaaaagtaaatgatcggtgggaggtctgtgtgagt
ctaagcgaagggcagtttcagcaggtcagctttgtaaatggaattgcgaccataagaggt
ggaacacatgttgactatgttgctaaccaaatcgccacccatgtgatggccgttgtgaac
aagaagaacaagcaagctaacatgaaattgcacacagtaaaggggtatttatgggtgttt
gttaatgcgctcattgacaaccccgcctttgattcacagaccaaggagaccttgaccact
cgtcagggaagctttgggtccaagtgtgatctctctgatgatttccttaagaaggttgct
gactcaggtgttgtcagcaatctcctttcttgggctgatttcaaactaagcaaggaactc
aagaagactgatgggagcaagaggtcaaatgtactcggcatccctaaacttgaggatgca
aatgacgctggtgggagggactctgataagtgcaccttgatccttactgaaggagattca
gcaaaggctcttgctatggctggcagaggtattgtaggaaatgatcactacggtgtgttt
cctctcaggggtaaattattaaatgtgagagaagcaacccataagcagatgatggagaat
gcagagatccaaaatattaagaaaataattggtctgcagcatggaaaggagtacaatagc
acaaaagacttgagatatggccatctcatgataatgacagatcaggaccacgatggttca
cacatcaaaggcttgctgatcaatttcattcactcatcctggccatctctcctaaaagtc
ccatctttcttggttgagttcatcacaccaattatcaaggcaaccaataaaaggagcaaa
tctgtaatttcattttactcaatgccagactatgaagcatggaaggagaggctaggggca
aatgcaagtgcttggtctataaagtactacaaggggctgggaaccagcactgcagacgaa
ggccgcgagtactttgaaaagattgcgcatcacaggaaggattttgtctgggcggatgac
aaggatggagatgctattgagttagcattcagcaagaaaaggattgctgataggaaagac
tggctaagcaattatcagcctggaacttgccttgatcaacgcgagaaacgcatcaagtac
agtgattttatcaacaaagagctgatactcttctcgatggcagaccttgaacggtcaatt
ccttcaatggttgacggccttaaaccaggccagaggaagattttgttttcctcattcaag
agaaacttggttaaagaaattaaggtggcacaatttattggttatgtgtctgaacactca
gcataccaccatggggagcagagtctagcaagtacgattctaggaatggctcaagattat
gttggcagcaataatataagtctattggagccccgtggccaatttggcaccagaaattcg
gggggcaaagatgctgccagcgcgaggtacatctacaccagattgccttctatcactcgc
ataattttcccgaaggatgatgatgttcttctgaactatttgaatgaagatggacagtca
atcgaacccacctggtacatgccaatcattcccatggttttggtcaatggaagtgaaggc
attggcactggatggagcacctataccccaaactataatccaagagatattgttgctaat
ctgaaacgattactaaatgatgatccgatcgtaccaatggatccttggtacaaggggttc
aagggctcttttgagaagacaactacaaaggcagcaggtgtcacatataccatctctggt
attatagaggcagccaatgacaccaagcttataattagtgagctccctgtccgccgctgg
actttagattacaaagaatttcttttgtccatgtgtcctcaaagtgtgaaggaaaaggaa
aaagagaaggacaagaataagaacaagagcaaggataaggacaaggacaaggacaagaat
aaggaaaaggaaccaccatttcttgaggatcttaggtctcaatgcgatgattcctctgta
tattttgaacttacattgagcgagaaaaacatggctatcgctatgcaagaaggccttgag
aagaaattcaagctgacaaacacaatgggaacgacaaacatgcacttatttgactcgaat
ggtaaaatacgaaaatatgacacaccggaggaaatacttcaagagtttttcacactgagg
ctcgaattctatggccgaagaaagataacaatgttgaaaaatatgagggtggaattattg
aagcttgagaacagagttcgttttattcgttctgttattagtggcgatataaaagtaaat
aacaggaagagggctgagctattcctggagcttaaggagaagaattttgatgctttcccg
aagaaaaaaaataagacagagccagttgcagtaggagctgaagaagaagatgaagaaaat
gaagagagtcctgctgaagatactgatggagttcttggaggtgattatgagtatcttctc
tcgatggcaatcggtactttgactctagagaaggtgaagcagctcatagcacaaaaggac
aatctagtgaatgaagttgaaaggctgagtaaaacagatccaaaatctctctgggtgaaa
gaccttgatgctcttgagaaggaactggatgtgcttgatgctgaacttaaagctgctgag
gagaagagaagactggcaagggaaaaatcgacaaaagatggtaaggcatctaaagcagca
cccaagagacagccaaagaagactgcagccaagtctcagaaggcaaatttggctgggagc
gatgatgaagattatgtagcagcaattcccaaaccggcagcacagaagaagaaaccagct
aagaaggcaagtgcacaggtgaaagatgctgaggatgaaattcttgaactaaaagaccgc
cttgctgcttctaatcttgactcttctccagaacatattgacatggaaactgagactaca
gagggaccggagaaaggaaagaagggagtggatgaaccaagcaatagaggtgcagcaaaa
aaggccatgtcatctttagcagactggtctgacgaagaagacttaacagcacccatccat
gagagcgaggacgaagggtttgccatggaagaagtgcaagttgagaagaaaactagaggc
agaaagcctgctgctgagaagtcaaagcctgccgtcaggaagagggcgccagctcagagc
aagggcatgaggcagaaagtgatggaagaaatattcaaacctacagacgatagtaccaca
agtgctccttctcctgtgaagaaagtgcgcaagatgagggcttcccccttcaacaagaag
agcggctcggttttccaaagagttgcaggtgcttcaactggaacagaagatactgacgct
ccccagtctgggagctctgctgagccagttgcccctaggaggacagccagggagaggaaa
gcaaaagcaatatatatcgattctgccagcgacaatgatgactctgaggacgaagatgtg
caggatttgagcgatgaatctgacttcgatgaggacgaagactaa
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integrated database retrieval system
