Brachypodium distachyon (stiff brome): 100839519
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Entry
100839519 CDS
T01717
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100839519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100839519
Enzymes [BR:
bdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100839519
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
100839519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
100839519
NCBI-ProteinID:
XP_003570586
UniProt:
I1HXW7
LinkDB
All DBs
Position
3:complement(4153490..4172769)
Genome browser
AA seq
1158 aa
AA seq
DB search
MPPVMPGPDAVAAEGDPDALPVPTYRSLAAPVRRPVDKFELLPAFLKVRGLVKEHIDSFN
YFITKGIKNIVQANNRIEARSDPSIYLRYKDIRVGEPSVQVDFRVETITPHFCRLTDRTY
SAPVIVDIEYTVGKTHVVHRKPNFIIGYMPIMLRSYACVLNGKDEAELARYGECPLDPGG
YFVVKGNEKVILIQEQLSKNRIIIDTDNKKRVIASVTSSTHEVKSKTVIVMDKEKIYLQL
NQFTKPIPIIVVMKAMGIQSDQEIVQMVGRDPRYGDLLYLSIQECASERIYTQQQALQYM
DDKVMFPGPGNVKEGRSKTLLRDVFVAHVPVENGNFREKCIYTAVMLRRMLDAILNSDTF
DDKDYVGNKRLELSGQLVSLLFEDLFKTMNSFAVDRMNKNSDMARSSPLDFSQLIMQQDL
ITTGLERAISTGNWDIKRFKMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRA
LQPSQWGMLCPCDTPEGEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEKLSLLSGEE
IHAPGSFLVMFNGLILGKHRQPQRFAKSMRTFRQSGKIGEFVSIFVNEKQHCIHIASDGG
RVCRPLIIADKGRSRVKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNALIALYEHLD
QDDVQRSSITHIEIEPMTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRA
DSLLYLLVYAQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG
FGRCIAMKKYTVTTEKYANGTISDRIAKPQRDKDGALIKQNMRALDEDGFVAPGQIIRNH
DIYVNKQTPKAIPKTPGTTLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTNDKLTIKCI
IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMI
ELLGGKAGVSCGRFHYGSAFGESSGNADHVDDISHTLVKHGFSYNGKDFLYSGILGHPLE
AYIFMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYG
ASMLIFERLLLSSDPYQVQVCRKCGLLGYYNYKLKTSFCSMCKNGENMAKMRMPYACKLL
FQELQSMNVVPRLKLTEG
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgccccctgtcatgcccggccctgatgccgtggcggccgagggggacccggacgcgctg
ccggtgccgacttaccggtcgttggcagcgccggtccgcaggccagtcgacaagttcgag
ctcctccctgccttcctcaaggttagaggccttgtcaaggagcacatcgactcgtttaac
tacttcatcaccaaaggaatcaagaacattgtccaggcaaacaaccgaattgaggcgcgc
agtgacccatccatttatcttaggtacaaagatatacgtgtcggcgagccgtcagtacaa
gtagattttagagtcgagactatcacaccacacttttgccgcctaactgatcggacctat
tctgctcctgtgatagttgatatcgagtacactgtaggaaagacacatgtggtgcacagg
aagccaaacttcatcatcgggtacatgcctattatgcttagaagttacgcttgtgttctg
aatggaaaggatgaagctgagctagcaagatatggtgagtgccctcttgatcctggtggt
tacttcgttgtgaaaggaaatgaaaaggtcatcctaatacaagaacagctatcgaagaat
cgtattattattgatactgataataaaaaaagggtaattgcatctgttaccagcagcaca
catgaagtaaaaagcaagacggtaattgttatggataaagagaagatttatcttcagctg
aatcaattcactaagccgattcctattatagtggttatgaaagctatgggaattcaaagt
gaccaagagattgtacaaatggttggaagagatccaagatatggtgaccttctatattta
tctattcaggaatgtgcttcagagagaatatatacacaacagcaagctttgcagtacatg
gatgacaaggtgatgtttcctggtccaggaaatgtgaaggaaggtcggtcaaaaacacta
ctccgtgatgtttttgttgcacatgtcccggttgaaaacgggaactttcgagagaagtgc
atatacactgccgtaatgttaaggcgcatgttggacgcaatcctgaattctgacaccttt
gacgacaaggattatgtagggaacaagaggctggagctgtctggtcaactagtatccttg
cttttcgaggatttgttcaaaacgatgaattcctttgctgtagaccgtatgaacaaaaac
agtgacatggcccgttctagtcctttggattttagccagttgataatgcagcaggatctc
ataaccactggtctggagagagctatttccacgggaaattgggacattaaacgatttaag
atgcatagaaaaggtgtatcacaggttctttctaggttatcctacatggcatctttaggc
tacatgacacgtataacaccacaatttgagaagacccggaaaacaagcgggccgcgtgct
ttgcagcctagtcagtggggtatgctttgcccttgtgatacacccgaaggggaagcttgc
ggattgacaaaaaatttagctttgttgactcatgttacaacggatcaagaggagggtcca
ctgatgaatttgtgttatagtctaggcgtggaaaaattatcacttctttctggagaggaa
attcatgcaccaggttcatttttggtcatgttcaatggattaatattggggaaacacaga
cagcctcagagatttgctaagtctatgagaacatttcgtcaatcaggaaaaattggagag
tttgtaagcatttttgtaaacgagaagcagcattgcattcacattgcctctgatggtggc
cgtgtttgtcgcccacttataattgctgacaagggcaggtcaagggtcaaagagcatcat
atgaaagaactgagggatggcgttcgttcattcgatgattttctgcgtgatgggttgatt
gaatatcttgatgtcaacgaggagaacaatgcattgatagcattatatgaacatttggat
caagatgatgttcaaagaagcagcatcactcacattgaaatagagccaatgaccatatta
ggagttgtagctggacttattccttatccacaccataatcaatctccacgtaacacttat
cagtgtgctatgggtaagcaagcaatgggaaatattgcttataatcagttgttccgagca
gactctctactctatttacttgtgtatgcacagcgtcctctgcttacaacaaaaacaatt
gagttggtgggatacgataagcttggggctgggcagaatgcaactgttgctgtcatgagt
tacagtggatatgatattgaagatgcaatcgtaatgaacaaatcatcccttgatcgaggt
tttggtcgttgcatagcaatgaaaaagtacactgtaacaacggagaagtatgcaaatggt
actatatcagataggattgctaaaccccaaagagataaagatggtgctttgataaagcag
aatatgcgggcattggatgaagatgggtttgttgcacctggtcaaataatccgtaatcat
gatatctatgtgaacaagcaaacacctaaggctatcccgaaaactcctggtactacatta
actgatagggactataaggactcacccgctgtttacaaaggtgtcgatggtgagacaacc
gttgtagatcgtgtaatgctttgttcggatacaaatgacaaattaaccattaagtgtatc
atccgtcacactaggcggccagaggttggtgacaagtttagtagcagacatggacagaaa
ggtgtttgtggcaccattgttcagcaggaagacttccccttctccgagagaggaatatgc
cctgatttaattatgaatccgcacggatttccaagccgtatgacgataggtaaaatgatt
gaacttcttggggggaaggctggcgtttcttgtggtcgattccattatggcagtgcattt
ggtgaatcaagtggcaacgctgatcacgttgacgacataagccatactcttgtcaagcac
ggcttcagctataatggaaaagatttcttgtactcaggcattttaggtcatcctcttgag
gcatatatcttcatggggccaatctactaccagaaactgaagcacatggttcttgataag
atgcatgctcgagctagtggaccgcgagtactactgaccaggcaacctactgaagggaga
agtcgcgatggaggcctgcgtcttggtgagatggagcgtgattgtttaattgcatacggt
gctagcatgctaatctttgagcgtctcctactatcaagtgatccatatcaagtccaggtt
tgcagaaaatgtggtttgttaggctactacaattataaactgaagacttccttctgctca
atgtgcaaaaatggagaaaacatggccaagatgaggatgccatatgcttgcaagcttttg
tttcaggaattgcaatcgatgaacgttgtcccacgcttaaaattgacggaaggataa
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integrated database retrieval system
