Brachypodium distachyon (stiff brome): 100839655
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Entry
100839655 CDS
T01717
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100839655
03036 Chromosome and associated proteins [BR:
bdi03036
]
100839655
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100839655
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100839655
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100839655
microRNA pathway
RISC loading complex
100839655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100839655
NCBI-ProteinID:
XP_003560616
UniProt:
I1GXM1
LinkDB
All DBs
Position
1:complement(32760050..32771969)
Genome browser
AA seq
953 aa
AA seq
DB search
MLEVLEMTPPPPRHQPAKGGGGRAGQARKQPLQSSVAQPKAEATPPEGAKKCGGRRRGGR
GRARPVAEPRPAMAQTAAAAAPPTRAVIGPPVPSKGLAFCRRPGFGTVGARCVVKANHFL
AEIPDKDLTQYDVKITPEVSSRCVNRAIIAELVRLYRASDLGMRLPAYDGRKSLYTAGTL
PFDAREFVVRLTDDDGGTGVPPREREYRVVIKFAARADLHHLRQFIAGRQADAPQEAVQV
LDIVLRELANQRYVPIGRSFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQMGLSLNIDMSS
TAFIEPLPVIEFVAQILGKDVMSRPLSDANRIKIKKALRGVKVEVTHRENVRRKYRISGV
TAQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQHAHLPCLMVGNQKKANYLPMEACKIV
EGQRYTKRLNEKQITSLLKVTCQRPREKEMDILQTVHQNGYDQDPYAKEFGINISEKLTS
VEARVLPAPWLKYHDAGKEKECLPQVGQWNMVNKKVINGGKVSHWACINFSRNVQETTAR
GFCQELAQMCQISGMEFNSEPVLPIYSARPDQVAKALKHVYNVALHKLKGKELELLLAIL
PDNNGALYGDIKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLVDA
LSWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQE
LIQDLYKTWHDPQRGTVTGGMVRELLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYEL
DAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSMDKSGNILPGTVVDSKICH
PTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSVSVVPP
AYYAHLAAFRARFYMEPELSENHTSKSSSGTNGTSVKPLPAVKEKVKRVMFYC
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggtcctggagatgacgccgccgccgccgcggcaccagccggccaaggggggc
ggcgggcgcgcggggcaggcgaggaagcagccgctgcagagcagcgtggcgcagcccaag
gcggaggcgacgccgccggagggagccaagaagtgcggcgggaggcggcgcggcggccgc
gggcgtgccaggcccgtggcggagccgcggccggcgatggcgcagacggcggcggcggcg
gcgccgccgacgcgcgccgtcattgggccgccggtgccgagcaaggggctggcgttctgc
cggcggccggggttcgggacggtgggcgcgcgctgcgtcgtcaaggccaaccacttcctc
gccgagattcccgacaaggaccttacccagtacgacgtcaagatcacgccggaggtgagc
tcccgatgcgtgaaccgggccatcatcgcggagctggtccgcctctaccgcgcatccgat
ctcggaatgcgcctcccggcttacgacggccgcaagagcctctacaccgccgggacgctt
ccgttcgacgcgcgcgagttcgtcgtgcgcctaaccgacgacgacggcggcaccggcgtc
cccccacgcgagagggaatacagggtcgtcatcaagtttgccgcgcgcgccgacctccac
cacctccgccagttcatcgccgggcggcaggcagacgcgccgcaggaggccgtccaggtc
ctcgacatcgtcctccgggagctcgccaaccaaaggtacgtgccgatagggcgctcgttc
tactcgccagacatacggaagccacagcgtctcggcgacggtctgcagtcctggtgtggg
ttctaccagagcattcggccaactcagatgggcttgtcgcttaacatcgatatgtcgtcc
actgcattcatcgagccgctgccggtgatcgagttcgtggcccagattttagggaaggat
gtcatgtcaaggccattgtctgatgcaaacagaattaagatcaagaaagcactgcggggt
gtgaaagttgaagttactcaccgggaaaatgtaaggcggaagtaccgtatttcaggggtg
acagcacaaccaacacacgaactgattttcccaattgacgatcaaatgaatatgaaatca
gttgtagagtatttcaaggaaatgtatgggttcacaattcagcatgcccatcttccttgc
cttatggtgggaaaccaaaagaaggcaaactatctaccaatggaggcttgcaagattgtt
gagggccagagatacacaaagaggttgaatgaaaagcagatcacctcgctgctaaaggtt
acatgccaaaggcctagagagaaggaaatggatattctacagacagttcatcaaaacgga
tatgaccaagatccttacgcgaaggaatttgggatcaacataagtgagaagttaacgtct
gttgaagctcgtgtccttcctgcaccttggctgaaatatcatgacgctggaaaagaaaag
gagtgcttgccacaggttggtcaatggaacatggtcaacaagaaagtgataaatgggggc
aaggtgagtcactgggcctgcataaacttctcaagaaatgttcaagaaaccactgctcgg
ggattctgccaggagttggcacaaatgtgtcagatttcgggcatggaattcaacagtgaa
cctgtgctaccaatatattcagctagaccagatcaagtagctaaggcacttaagcatgtg
tataatgtggcactacacaaactcaagggtaaagaacttgagcttcttttggccattctc
cctgacaacaatggtgctttatatggtgatatcaaacgtatctgtgaaactgatttggga
ttgatatcacaatgttgcttaactaagcatgtttttaagattagcaagcagtacttggca
aatgtttcgcttaaaatcaatgttaagatgggaggaagaaacactgtgcttgtggatgcg
ctaagttggaggattccattggtcagtgacataccaactattatatttggtgcggatgta
acacatcctgaaaccggggaggactctagtccatccatcgctgcagttgtggcttctcaa
gactggccagaagttacgaagtatgctggattggtgtgcgcgcaggcgcatcggcaagag
ctcattcaggacctttataagacatggcatgaccctcagagaggcacggtcacaggaggc
atggtcagggaactcttaatatccttcaggaaggccactgggcagaagccattaagaata
attttctaccgtgatggtgttagcgaaggccaattctaccaagttctcctgtatgagtta
gatgctatccgtaaggcatgtgcatccctggaaccaaattaccaacctcctgtaacattc
gtggtcgttcaaaagcgtcaccatacaaggctgtttgcaaacaatcacaaggacagaagt
agcatggacaagagtggaaatattttgcctggaactgttgttgattcgaagatatgccat
ccaacggagtttgatttctacctctgtagtcatgctggaatccagggaacaagtaggcca
gctcactaccatgtcctctgggatgagaacaatttctcagcagacgagatgcagacgttg
acaaacaacctttgctacacgtacgcacggtgcacacgctctgtttctgtcgtccctcct
gcatactatgcgcatttggctgcattccgggcacggttctacatggagccggagctctca
gagaaccacacatcgaagagctctagcggaacgaacggaacctcggtgaagcctttgcct
gctgtgaaagagaaggtgaagagggtgatgttctactgttga
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