Brachypodium distachyon (stiff brome): 100839764
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Entry
100839764 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100839764
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100839764
Enzymes [BR:
bdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100839764
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100839764
Prokaryotic type
100839764
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100839764
NCBI-ProteinID:
XP_003578802
UniProt:
I1ITQ5
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All DBs
Position
4:44865609..44870972
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AA seq
386 aa
AA seq
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MSAASSDSAAASKRPFDPSLADPSLPSKLQRSSHPDISPAEKPEGVGAAGPESEAMAAAR
VPRGQRYLVAVEYAGTRFCGSQQQPDQRTVVGVLEEAFHKFVGQPVSVFCSSRTDAGVHA
LSNVCHVDVERISKRKPGEVLPPHDPGVVKRAVNHFLQKNEGDIMVTDVRCVPPDFHARY
KALERTYHYRILSGPERQSVFEKNSAWHIPEDLNIQAMKKACDLLVGHHDFSSFRATGCQ
AKSPVRTLDELTVTEVFPFMFFPSSVERSEMESPDGSLVYSRTSLMRASAEGSDAPSTAS
GKSVSENGQEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGIGDLTTADVERILDA
KAVTAAPPMAPASGLYLANVKYDLSI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccagctctgactccgccgccgcctccaagcggccgttcgacccctccctt
gccgacccctctctgccttccaagctccagcgttcctcccatccagacatctcgccggcg
gagaagccggagggcgtcggagcggcggggcccgaaagcgaggcgatggcagccgcccgg
gtccctcgggggcagcggtacctggtggcagtggaatacgcaggcacccgcttctgcggc
tcgcaacagcagcccgaccagcgcaccgtcgttggcgtcctcgaggaagcatttcacaaa
ttcgttggacagccagtctcagtcttctgttctagtcgaacggatgcaggggttcatgct
ttgtcaaatgtttgtcatgttgatgtggagcggataagtaaaaggaagcctggtgaagtg
ttgccacctcatgaccctggagttgtgaaacgtgcagtgaaccactttctgcagaagaat
gaaggtgacataatggtgactgatgttcgttgtgtcccaccagacttccatgctagatac
aaagccctagagcgcacgtaccactatcgtatactttctggacctgagcgacagtcagtc
tttgaaaaaaactcagcttggcacatacctgaggatctaaatatacaggctatgaagaaa
gcatgcgatttacttgtcgggcatcatgatttcagttcattccgagcaactggatgtcag
gcaaaatctccagtgagaactttggatgagctcactgttacagaagtatttcctttcatg
ttttttccttcaagcgtagagcgatcagagatggaatcaccagatgggtctcttgtttat
tcgagaacatcactcatgagagcttctgcagaaggatctgatgctcctagtactgctagt
gggaaatcagtatctgagaatggacaagagtttggaaagagattaaggcaccgctgcttt
gttgttactgcaagggcacggtcatttctctaccaccaggtacgattgatggtcggcctt
ctgaaatctgttgggattggagatctaacaactgcagatgttgagagaattttggatgcg
aaggcagtgactgctgcacctcctatggcacctgcttccggtctttaccttgcaaacgtg
aaatatgacctgagtatttga
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