Brachypodium distachyon (stiff brome): 100839798
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Entry
100839798 CDS
T01717
Name
(RefSeq) serrate RNA effector molecule isoform X1
KO
K27103
serrate RNA effector molecule
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100839798
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
100839798
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Dehydrin
Motif
Other DBs
NCBI-GeneID:
100839798
NCBI-ProteinID:
XP_003563493
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Position
1:complement(29671791..29679587)
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AA seq
701 aa
AA seq
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MADVIDPGSEAPRARRPPPPPPDSPEDRSLPIPPPPPPGGPPPTRKRSRSPPRPSLPPPP
PLGSSRPERYRDRDRDNNRGGRGGGSTSPPPRRRHSPSRRSPSPPFKRSRRDDGYDRRGR
GSPPRYDRGGGRGGYGNDRYHGRHPNRASDWPDSGFGASNDGPGITREGLMTYKQFIQVL
EDDISPAEAESRYQEYKTEYITTQKRAYFDLHKNEDWLKDKYHPTNLLSVIERRNERCKV
VAKDFFLDLQNGTLDLGPGITAAAPSKSENGSDVNSEDDGDGDKRRKHIRGSSKEKDPLS
AAPKAHPVSSEPRRIQTDIEQTLGLVRRLDTEKGILGNILSSGDHEKSDVDKSHIGSMGP
IIIIRGLTTVKGLEGVELLDTLLTYLWRVHGVDYYGMSETNEAKGPRHVRADSKNSSTIN
VNAVDWEKKLDTFWQERLSGQDPMVILTAKDKIDAAAAEVLEPHVRKIRDEKYGWKYGCG
AKGCTKLFHAPEFVYKHLRLKHPELVLEVTSKVREDLYFQNYMNDPNAPGGTPVMQQSAP
DKSRRGMDSRLRYDRTNRRDYDRADRDGGRYGRGDGSPNRDGPDDQMFDAFRGRGSNAPF
GSEFPAPPILMPVPGAGPLGPFVPAPPEIAMHMLREQGPPPFEPNGAPHGNPQVLGQMMG
GGPAPIIAMPPSFHHDPRRLRSYNDLDAPDEEVTVLDYRSL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtcatagaccccggctccgaggctccccgggcgcgccgtccgccgcctccg
ccgcccgacagcccagaggaccgctcgctgccgattcccccaccaccgccccccggcggc
ccaccgcccacccgtaagcggagccgctcgccgccacgcccctccctccccccgccgccg
ccactcggctcttcgcgtcccgagcgctaccgcgaccgagaccgcgacaacaaccgcggc
gggcgtggcgggggcagcaccagccctccgccgcgccgccgccactcgccgtccaggagg
tccccgtcgccgccgttcaagcggtcgcggagggacgacggatacgaccgccgaggccgc
ggcagcccaccacggtacgaccgtggcggaggcagaggtgggtacggcaatgaccggtac
catggcaggcatccgaatcgtgcttcagattggcctgattcaggatttggggcatcaaat
gatggtcctgggatcacaagggaaggcttgatgacatacaaacagttcatccaagttctt
gaggatgatatatcaccagctgaagctgagagccggtaccaagaatacaagacagagtac
atcactacccagaaacgtgcttattttgatctccacaaaaatgaagactggttgaaagac
aagtaccatccaaccaacttattatctgtcattgaaaggaggaatgaacgttgtaaggta
gttgcgaaggacttctttcttgatttgcaaaatggaacccttgaccttggtcctggaata
actgctgctgcaccaagtaaatcagaaaatggcagcgatgtaaactctgaagatgatgga
gatggtgacaaaagaagaaagcacatcaggggttcctcaaaagaaaaagatcctctttct
gctgctcccaaggctcatccagttagctctgaacctcgacgaattcaaactgacatagaa
caaactttaggcctggtgcgtaggctggacaccgagaagggtattctggggaatatcctg
tcaagtggtgatcatgagaagtcagatgtagacaaatcacatattggatcaatgggccct
ataattataattcgaggcttaacgactgtcaagggccttgaaggcgttgagctccttgat
actcttcttacctatttatggcgtgttcatggagttgattactatggcatgtctgaaacg
aatgaggcgaaaggccctcgtcatgtgagagcagatagcaagaattctagtacaattaat
gtcaatgctgttgattgggagaagaagctggatacattctggcaggaaaggttgagtggt
caagatcccatggttatattaacagccaaggacaaaattgatgcggcagctgctgaagtt
ttagaacctcatgtcaggaaaataagggatgaaaagtatggatggaaatatggatgtgga
gccaagggctgtacgaaacttttccacgctcctgagtttgtttacaagcatttgaggctc
aagcatccagagctggtgttagaagttacttcaaaagtccgagaggatctttatttccaa
aactacatgaatgaccctaatgcaccaggtggaacaccagttatgcagcagtctgcacca
gacaaatcaaggcgtggtatggacagtcgtctgagatatgaccgtaccaatcgcagagat
tatgatagggcagatagagatggaggcagatatggtcgaggtgatggctctccaaaccgt
gatggacctgatgatcagatgtttgatgccttccgtggacgaggctccaatgctcctttc
ggttctgaattccctgctccgccaatattgatgcctgttcctggtgctggtccactggga
ccatttgttcctgcgcctccagaaatagccatgcatatgctgagagagcaaggacctcct
ccatttgaaccaaacggtgcaccccatggcaacccacaagtgcttggacaaatgatgggc
ggaggtccagcaccaattatagccatgccaccatcttttcatcatgatcctcgtcgtttg
cgaagctataatgaccttgatgcccctgatgaggaagttactgttcttgactacagaagt
ttgtag
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