KEGG   Brachypodium distachyon (stiff brome): 100839829
Entry
100839829         CDS       T01717                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03083  Polycomb repressive complex
bdi04120  Ubiquitin mediated proteolysis
bdi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100839829
   04120 Ubiquitin mediated proteolysis
    100839829
  09126 Chromosome
   03083 Polycomb repressive complex
    100839829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100839829
   04121 Ubiquitin system [BR:bdi04121]
    100839829
   03036 Chromosome and associated proteins [BR:bdi03036]
    100839829
Membrane trafficking [BR:bdi04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    100839829
Ubiquitin system [BR:bdi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     100839829
   Cul7 complex
     100839829
Chromosome and associated proteins [BR:bdi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     100839829
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     100839829
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 100839829
NCBI-ProteinID: XP_024317857
LinkDB
Position
3:6650043..6652020
AA seq 167 aa
MAGGGGSKMLTLESSDGHKFEVKEAIMAAASGTIRIMVEDDCAGGVIPLPQVTGRILSRV
IDYCNKHYADPDAAAAAAADPFSSGDPVLDRFDGDFVGGLDQDTLFDIMVAANYLEVQRL
LDLTCKTVADQIRGKTVEEMREHFHVVNDYTEEEEKAVRRENAFAFE
NT seq 504 nt   +upstreamnt  +downstreamnt
atggccggcggcggcggcagcaagatgctgacgctggagagctcggacggccacaagttc
gaggtgaaggaggcgatcatggcggcggcgtcggggacgatccggatcatggtggaggac
gactgcgccggcggcgtgatcccgctgccccaggtgacgggccgcatcctgtcccgcgtc
atcgactactgcaacaagcactacgcggaccccgacgccgccgccgccgccgccgccgac
cccttctcgtcgggcgaccccgtgctggaccgcttcgacggcgacttcgtgggcgggctc
gaccaggacacgctcttcgacatcatggtcgccgccaactacctggaggtgcagcggctg
ctggacctgacgtgcaagacggtggccgaccagattaggggcaagacggtggaggagatg
cgcgagcacttccacgtcgtcaacgactacaccgaggaggaggagaaggccgtccgcagg
gagaacgcctttgccttcgagtag

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