Brachypodium distachyon (stiff brome): 100839859
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Entry
100839859 CDS
T01717
Name
(RefSeq) RNA-binding protein 1
KO
K14411
RNA-binding protein Musashi
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100839859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100839859
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100839859
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
100839859
NCBI-ProteinID:
XP_003558767
UniProt:
I1GMV1
LinkDB
All DBs
Position
1:complement(5113874..5117879)
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AA seq
345 aa
AA seq
DB search
MALEMRKLYVGGLPPSAHEEELKEHFARYGEVLCARVVRHRDTGYPRGFAFVEFADDEGP
RAALEDKEKANHVFGGRTVDVKRARVKPRYQTEQSFYQYNQNQSPGWYNQSSSNTNAGYA
GYGSRSCDPNKVFIGGLRGNITKEDLKSYFGKFGAINDVVVICDGLTHKSRGFGFITFDS
EDSMLKVLENSYHDLNGTKVETKVAIPKDHSYYHHSQQNSPMNWAGNSPSYSYGVYPPQN
LHYIVTNQNHYMVPYMYPPFATGEYGYMPNTGAPMVARQGGSIYRGYRAPSAYDYVGTNL
NGVYSVDTGSESKTNQVMTNQQEVDSPRTNTSKQEPSDSVSTTLL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggagatgcggaaactgtacgtcggcgggctcccgccgtcggcgcacgaggag
gaactgaaggaacactttgcccgctacggcgaagtgctgtgcgcccgtgtcgtccgtcac
cgggacaccgggtatccccgtggcttcgcgttcgtggagttcgccgacgacgaaggcccg
cgtgccgcgctcgaggataaggagaaggccaaccacgtcttcggcggccgcactgttgat
gtgaagagagcgagagtgaagccgcgatatcaaactgagcaatctttctaccaatacaat
caaaatcagagtccaggatggtacaatcaatcttctagcaacacaaatgctggatatgct
ggttatggcagtaggagctgtgatccaaacaaagtctttattggtgggctacgaggtaat
attaccaaggaggacctcaaaagttattttgggaagtttggcgcaataaatgatgttgtt
gtgatctgtgatggacttactcataagtcgaggggctttggttttattacgtttgactca
gaggattctatgctgaaggttctggagaattcatatcatgacttgaatggaacaaaagtg
gaaaccaaggttgcaattccaaaggatcacagctactaccatcatagtcagcagaatagt
ccgatgaactgggctggaaacagtccttcttacagctatggagtgtaccctccacagaat
ctgcattatatcgttactaaccaaaaccattacatggttccttacatgtatccaccattt
gcaactggagaatatggctacatgcctaacacaggtgctcccatggtggcaaggcaaggt
ggttcgatatacagaggttatagagcaccttctgcatatgattatgtgggtacaaatctc
aatggtgtttacagtgtggatactggaagtgaaagcaaaactaatcaagtcatgacaaat
cagcaagaagttgacagccccagaaccaatacttccaaacaagaaccttcagactcggtg
tctacgaccttattgtga
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