Brachypodium distachyon (stiff brome): 100839974
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Entry
100839974 CDS
T01717
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3
KO
K14026
SEL1 protein
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100839974
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Motif
Pfam:
Sel1
TPR_3
Motif
Other DBs
NCBI-GeneID:
100839974
NCBI-ProteinID:
XP_010228849
UniProt:
I1H798
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Position
1:complement(66425397..66431870)
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AA seq
677 aa
AA seq
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MAGVFHRRLLLLVVVTAAALLPRAASVRPFVLVLSGDDFLKDASGAHPSLPSADADADDW
DDFADDSPATDPLLSPSSWVPLLDPTTPSPSGDEPDSPSDALFVAGARAMISAASSGDDA
AFSTASAQIEAAAAGGHPGAQSALAFLSGAGMTRPVSRSRAFLLHKFAADAGDLQSKMAL
AYAYFRQEMYEEAVTLYAELAEAALTSSLISKEPPVIEPVRLHSGTEENKEALRKSRGED
DEDFQITEYQAQRGNAAAMYKLGLLYYYGLRGLRRDYGKAYHWFSKAVEKGDTRAMELLG
EIYARGAGVERNYTEAYKWLILAAKQQQYSAYNGLGYLYVKGYGVETKNVTKAKEYFEIA
AENKEHGGYYNLGVLYLKGIGVKRDVMTACNYFLRAVNAGQPKAIYQVAKLFQKGIGLKR
NLHMATVLYKSVAERGPWSSLSRWALESYLKGDIGKALLLYSRMADLGYEVAQSNAAWIL
DRYGEENICMGESGFCTDTERHLRAHALWWQASEQGNEHAALLIGDAYYYGRGVGRDYER
AAEAYMHAQSQSNAQAMFNLGYMHEHGHGLPLDLHLAKRYYDQAVEVDSAAKLPVMLALT
SLWIRKNYAGSFAVHFIDSLPEIYPVVEEWVEDVLMDEGNATILTLFACLVTVLYLRERQ
RRQVVADNPQQPDGAPN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtcttccaccgccgtctcctcctccttgtcgtcgtcaccgccgccgccctc
ctcccacgcgccgcctccgtacgacccttcgtactggtcctctctggtgacgacttcctc
aaggacgcctccggcgctcatccctcgttaccctccgccgatgccgatgctgacgattgg
gacgacttcgctgacgattcccccgccaccgaccctctcctctccccgtcgtcttgggtc
cccctccttgaccccaccactccctccccgtcgggtgatgagccggactcaccgtccgac
gcgctcttcgtcgcgggcgcccgcgcgatgatctcggcggcgtcttcaggggacgacgcc
gctttctcaactgcgtccgcgcagatcgaggctgcggccgcgggtggacaccccggtgcg
cagtcggcgctggcgttcctctccggagccgggatgacacgcccggtgtcccgctcgcgt
gcgttcctgctgcataaattcgccgccgacgcaggagaccttcagtccaagatggcgctc
gcctacgcctatttccgtcaggagatgtatgaagaggctgtcacgctatatgctgaactt
gcagaggctgcactgacaagctccttaatctcgaaggagccaccagtgattgaaccagtc
cggctacacagtggaactgaggagaacaaggaggccttgaggaagtcccgtggagaggat
gatgaagatttccagatcacagagtaccaggcacaacgaggcaatgctgctgcaatgtac
aaattagggcttctgtattattatggactacgaggactcaggcgtgattatggtaaagca
tatcattggttctctaaggctgttgagaaaggcgatacacgtgcaatggagcttctggga
gagatctatgctagaggtgctggagtggaaagaaactacactgaagcatacaagtggttg
atacttgcagcaaagcagcaacaatactcagcttacaatggacttggttatctctatgtg
aaaggctatggggtggagacgaaaaacgtgacaaaagcgaaagaatattttgaaattgca
gctgagaataaggaacatgggggttattataacctcggtgtgttgtatttaaagggtatt
ggtgtaaagagggatgtgatgacagcctgcaattattttcttcgtgcagttaatgccgga
cagccaaaagctatttatcaagtggcaaaactgttccaaaaaggcattggacttaagagg
aatctccatatggccacagttctgtacaagtctgttgccgagagagggccctggagctcg
ctgtctagatgggctctggaatcttatttgaaaggtgacatagggaaagcgttgctcttg
tattctagaatggcagatcttggatatgaggttgcccaaagcaatgctgcctggattctt
gataggtatggtgaggaaaatatttgcatgggagaatctggcttctgtacagatacggaa
agacatctccgtgcacatgctttgtggtggcaagcatctgagcagggtaatgaacatgct
gctttgttgattggtgatgcctactactatggacggggtgtagggagggactatgagcgt
gcagcggaggcatatatgcatgctcagtcacagtctaatgcccaggccatgtttaacctt
gggtacatgcatgagcatggtcatggacttccccttgatctgcacttggcaaaaagatat
tatgatcaggctgttgaggtggattcagcagctaagcttcctgttatgcttgcactaact
agtctatggataaggaagaattatgctggcagttttgcggttcattttattgattccctg
ccggaaatatatcctgtagttgaggaatgggtggaggatgtcctgatggatgaagggaat
gcaacgatattgactctctttgcttgccttgtaactgtcctgtacttgcgagagcgtcag
aggcgtcaggtggtggctgacaacccccaacaacctgatggtgcaccaaattaa
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