Brachypodium distachyon (stiff brome): 100840100
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Entry
100840100 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase makorin isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100840100
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100840100
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100840100
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-C3HC4
zf-CCCH_RBM22
zf-RING_2
zf-CCCH_DUS3L
zf-RING_5
RING_XB3-XBAT31
zf-CCCH_PARP12
zf-C3HC4_4
zf-RING_UBOX
zf-CCCH_9
zf-C3HC4_2
Med13_N
IBR_1
Motif
Other DBs
NCBI-GeneID:
100840100
NCBI-ProteinID:
XP_003563906
UniProt:
I1GYR5
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All DBs
Position
1:40169473..40174345
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AA seq
383 aa
AA seq
DB search
MSTKRVLCKFFVHGACLKGEYCEFSHDWRDQANNVCTFYQKGSCSYGSRCRYDHVKVSHN
NPVPPPPSSSTPTRNSSLPLPPSSTVARVVSTSLQPTSAGRPVHIGHQTNPSNQRQQISM
DMLAHSESKPAWRNDFQLDSVSEDGIDWSSNRTVQNQTSKKLADMPICSFAAAGNCPYEE
ECPSMHGDLCTTCGKMCLHPYRPDEREEHMKLCEKNHKRIEALKRSQEIECSVCLDRVLS
KPTAAERKFGLLSECDHPFCISCIRNWRGNSPTSGMDVNSALRACPICRKLSYYVIPSVL
WYFSKEEKMEIIDNYKSKLKSIDCKYFDFGTGTCPFGTSCFYKHAYRDGRLEEVILRHLD
AEDGTTLIAKNIRLSDFLTRLHL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccaagagggttctttgcaagttcttcgttcatggagcttgcttgaaaggagag
tactgtgagttctcccatgactggagggaccaagcaaataatgtttgcacgttttaccag
aaaggctcatgctcatatggtagtcgttgcagatatgaccatgtcaaagtttctcataac
aacccagtgcctccgccaccatcatcaagtactccgacacgcaactcctcactgcctctg
ccaccatcaagcactgtagcacgtgtcgtgtctacttctctacaacctacaagtgctgga
cgtcctgttcatattggacatcaaacaaatccaagcaaccaaagacaacagatatctatg
gatatgctggcacattctgaaagtaaacctgcatggaggaatgatttccaacttgacagt
gtatcagaagatgggattgactggtcatccaatcgaactgtgcaaaaccaaacatccaag
aaacttgctgatatgccaatttgttcttttgctgctgctggtaattgcccgtatgaggaa
gagtgccctagcatgcatggagatttgtgcacaacctgtgggaaaatgtgcttgcatcct
tatcgtcctgatgaaagagaggaacatatgaagctatgtgaaaaaaaccacaagcgtatt
gaggctttgaaacgtagccaagagatagaatgcagtgtctgcttagaccgtgtgctctcc
aagcctacagctgcagaaaggaaatttggactcttatctgaatgtgaccatcccttctgc
atctcatgcattagaaattggcgtggcaattctcctacgtctggtatggatgtgaactca
gcactgagggcttgtccaatttgccgcaaactatcgtactatgtgattccaagtgttctt
tggtacttctcaaaggaggaaaagatggagatcatcgacaactacaaatcgaagctcaag
tctatagattgcaagtactttgattttggaacgggtacttgcccatttggtacaagctgt
ttctacaagcatgcttacagggatggccgcttggaagaggtcatactgcgacatctcgat
gctgaagatggaactacacttattgccaaaaatattaggttgtcagacttcctcactcgg
ctgcatctttag
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