Brachypodium distachyon (stiff brome): 100840113
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Entry
100840113 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100840113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100840113
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100840113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100840113
NCBI-ProteinID:
XP_003567614
UniProt:
I1HEZ4
LinkDB
All DBs
Position
2:10324811..10329677
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AA seq
262 aa
AA seq
DB search
MGRTNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD
AIYGRDGYNFDGYRLRVELAHGGRGQSYQYERPRSYSSGRRGGVSRRSEYRVLVDGLPSS
ASWQDLKDHMRRAGDVCFSDVYREAGAIVGIVDYTNYDDMKYAIRKLDGTEFRNAFSRSY
IRVREYDARSRSRSRSLSYSRSRSCSRSESPRSVSRSPLPVDERSLSRSRSPDSSASPRK
SVSRSPSRSRSLSRSASPVRSE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaccaacagctgcaccatttatgttggcaatctccctggagacatccgtgag
agggaggttgaagatctcttctacaagtatggccgtattgtggatattgacttgaagatt
cctccacgacctcctggctatgctttcgttgagtttgaggatccccgtgatgcagatgac
gcaatttatggccgtgatgggtataactttgatggctacaggttgcgggtggaattagct
catggtggaagaggccaatcttaccagtatgaacgcccaagaagctatagcagtggacgc
cgtggaggtgtttctaggcgctctgagtaccgtgttttggttgatgggttaccttcgtca
gcgtcatggcaagatctcaaggaccatatgcgacgggctggcgatgtctgtttctctgat
gtataccgtgaggctggagcaattgttggaattgtggattatacaaactacgatgacatg
aaatatgcgattaggaagcttgatggtacagagttcagaaatgcattttcacggtcatat
atcagggtgagggagtatgatgctagatcaagaagcagaagccgtagcctttcttactcg
agaagtcgcagctgcagcaggagcgagagtccacgatctgtctctcgatcaccgttacct
gtggatgaaagatcgctgtcaagatcccgatcccccgattcttctgcctctcctagaaaa
tctgtgagcagaagccctagcaggagcaggagcttatcccggtctgcatctcctgtgaga
tctgaatga
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