Brachypodium distachyon (stiff brome): 100840139
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Entry
100840139 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100840139
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100840139
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100840139
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100840139
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100840139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
DUF2256
Motif
Other DBs
NCBI-GeneID:
100840139
NCBI-ProteinID:
XP_003574640
UniProt:
I1I7X5
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All DBs
Position
3:complement(40657698..40665110)
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AA seq
970 aa
AA seq
DB search
MAEVPGSSTAAAVLAVVMLVVVPAMALLVRRSLRQAAARREEVRRRARLAAEESELAERE
SVRAYYAELFPGVVHAAEVPEAPMWTPQPVAPAHEEPEVVAETQQQPQPPVGVCAVCFKP
TTFRCKQCKAVKYCSFKCQIAHWRQGHKDECHPPSVNARPDDAAEISVAKEGKAEQGGAS
EETDINMPVAVGSETSSANHTLRSLNDKRKDMPFKEVPATTEVPENGHSDSVVKLRQSTP
QVASLDSKKTESNIKPTNFVENGSYKDLDEVLIYKSQASAPKMSGHSSYINEDLSVHSKE
HGKARDADVGVDYSQASRARKPADMNNSQAAATVAMAPKSSRASLRVEVEESKIKVTCTD
NIESSKCVPSVLAANKVSSIRDVCSVTPNPSKRADNPSERAGSTANSLASSLKKIVRQQT
ASKVVRHYPSELTLFPYELFIKLYDKVELRPFGLHNLGNSCYANAVLQCLMFTRPLTAYF
LGGLHSKNCSNKEWCFMCEFEKLVVEGKHGKTALSPTGILSHLHEIGSSFGPGKQEDAHE
FLRHSIDAMQSVCMKEARKSGAHRLAEETTLVQLIFGGYLRSKIKCTRCHGSSEQSERML
DLTVEIDGDISSLEEALQRFTSTEVLDGNNRYQCTRCKSYERAKKKLTISEAPNVLTIAL
KRYQSGKFGKISKAIRFPETLNLSSYMSTTDDNSPVYSLYGVVVHHDVMNAAFSGHYVCY
VKDTHGKWYKTDDSQVKSVSLENVMSKCAYMLLYARCSPRAPSSVRHAIMVQDPARAKKT
RHKQGPIPDHITDNLTGTFDEFGESPYPPAESPSPSESSSLFSNSDAGSHSTVSTDSSES
TRNSTSTDEYEQYLFGTPDQIYQGGSAAAHDETDYTTYSRSRSTLGTSSSGREADHAGSA
ERFIEQGTRGGWFEGGESSSYLYTDRSKQQSSSKLTEQYRQLGTEHDPGEVRGSVLSRRS
ARERTAQTFY
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtgccggggtcgtcgaccgcggccgccgtgctggcggtggtgatgctcgtc
gtcgtgccggccatggcgctgctggtgcggcggagcctgcggcaagccgcggcgaggagg
gaggaggtgcggcgccgcgcgcggctcgcggcggaggagtccgagctggcggagcgggag
tcggtgcgcgcctactacgcggagctgttcccgggagtggtgcacgcggcggaggtgccg
gaggcgccgatgtggaccccgcagccggtggctccggcgcatgaggagccggaggttgtg
gcggagacgcagcagcagccccagccgccggtgggggtctgcgcggtatgcttcaagccg
accacgtttaggtgcaagcagtgcaaggccgtcaagtactgttccttcaaatgccagata
gcccactggagacaaggtcataaagatgaatgccatccaccaagtgtcaatgctaggcca
gatgatgcagctgaaatttctgttgcaaaagaaggaaaagctgaacagggtggagcttct
gaagaaactgatatcaacatgccagttgctgttgggtcagaaacttctagtgcaaaccat
actttgaggagcttaaatgataaaaggaaagatatgcctttcaaggaggtacctgctacc
actgaggttcctgaaaatggccattctgacagtgtggtcaaacttcgtcaaagtacccct
caagtagcatctcttgacagtaaaaagacggaatcaaatatcaagcctacaaattttgtt
gagaatggctcttacaaggacttagatgaggtgttgatttacaaatctcaagcttctgcg
ccgaagatgagcggccatagcagttatataaatgaagatttgtcagttcattccaaagaa
catggtaaagctcgggatgctgatgttggtgtggattactctcaggccagtcgtgctaga
aaacctgcagacatgaacaattctcaagctgctgcaactgttgccatggcacccaaaagt
tctagggcttctcttcgtgtggaagttgaagagtcaaaaataaaagtcacttgtactgac
aacatcgaaagctcaaaatgtgtgccatcggtcttagctgctaataaagtttcttccatt
cgtgatgtctgttctgtaacacctaatccatcaaaaagggctgataatccatcagagagg
gcaggttcaactgcaaatagccttgcgtcgtctctgaagaaaattgtcaggcaacaaact
gcttccaaagttgtgaggcattatccatcagaattgacactttttccatatgaacttttc
atcaagctctatgacaaggttgaattgcgcccttttggtcttcataaccttggcaatagt
tgctatgcaaatgctgttcttcagtgcttgatgtttactcggcctcttacagcatatttt
ttaggagggcttcattcaaaaaattgctccaataaggaatggtgtttcatgtgtgaattt
gaaaaacttgttgtggagggcaaacacggcaagactgctttgtcaccaactgggatactc
tcccatttgcacgagattggaagtagctttggccctggtaaacaagaagatgctcatgaa
tttcttcggcactccattgatgctatgcaatctgtatgcatgaaggaagccagaaaaagc
ggtgctcatcgtttagcagaagaaaccacacttgtgcaattgatattcgggggttatctg
cgatctaagataaaatgcacaaggtgccatggtagttccgagcaatctgagcgtatgttg
gatcttactgttgaaatagatggcgacatcagttcgctcgaagaagcacttcagcgattt
acatctacagaagtcttggatggaaataatagataccaatgcactagatgcaaatcgtac
gagcgtgctaagaagaagttgacaatatcagaagcaccaaatgtcctgacaattgcattg
aaaagatatcagtctggcaagttcgggaagatcagcaaagccatcagattcccagagacc
ctgaacttgtctagctacatgagcacaactgatgacaattcacctgtttacagcctatat
ggagtggttgtccatcatgatgttatgaatgctgccttttctggtcattatgtatgttac
gtcaaggacacacatgggaagtggtacaagacagatgacagtcaggtcaaatcggtgtcc
ctggaaaatgtcatgtcgaagtgtgcatacatgctgctctatgcaaggtgttcaccaagg
gcgccaagctctgtgcgacatgcgataatggttcaagaccctgcacgtgcgaagaagaca
aggcataagcaaggacctataccagatcacattactgataaccttactggtacatttgac
gaatttggagagtcaccatatccaccggcagaatctccaagtccaagtgagagttcatcg
ctgttcagcaactctgatgctgggtcacacagcacagtgagcacagatagcagtgaaagc
acaaggaattcaaccagcactgatgagtatgaacagtacttatttgggactccagatcaa
atttaccagggagggtctgcagcagcacacgacgagacagactatacaacatattcccgg
tcgagatctaccttgggcaccagctcatctggccgggaggcggatcatgcaggcagtgcc
gagagatttattgagcagggtaccagaggtggctggttcgagggtggtgagagctcgtcc
tacttgtacactgaccgaagtaaacaacagtcgagtagtaagttaacagaacaatatagg
cagttaggtacggagcatgaccctggagaagtcaggggcagtgttttatcgagaagatcg
gctagggaaaggaccgcccaaacattttattga
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