Brachypodium distachyon (stiff brome): 100840368
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Entry
100840368 CDS
T01717
Name
(RefSeq) protein spotted leaf 11
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100840368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100840368
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100840368
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
U-box type E3
100840368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
zf-Nse
Arm_2
zf-C3HC4_4
HEAT_2
KAP
zf-C3HC4_2
zf-C3HC4
RsaA_NTD
zf-RING_2
zf-rbx1
CybS
T3SS_ATPase_C
Motif
Other DBs
NCBI-GeneID:
100840368
NCBI-ProteinID:
XP_003578975
UniProt:
I1IHD5
LinkDB
All DBs
Position
4:complement(3505607..3511200)
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AA seq
695 aa
AA seq
DB search
MAGDREEDEEGEGVALAPRPATATERVAKAVDAATTCSTAGEYRNAYKRPLLALSRRIRL
LGPFAEELRERRAPAEKEEDGEEKTLAPLADALEKALDLLRLGREGSRISLVFERDRVMK
QFQEVIAQLEQALCDFPCNELDISDEVREQVELVHAQLKRAKERVDMPDDEFYNDLLSLY
NKTYDPSAEQAILERLSEKLHLMTIIDLTQESLALHEMVASGGGQDPGEHIEKMSMLLKK
IKDFVQTRNPEMGPPMVSTVMDSNGEQKSIAVPDEFRCPISLELMKDPVIVATGQTYERT
CIEKWLASGHHTCPTTQQRMANTTLTPNYVLRSLISQWCETNGVEPPKRSSQPDKPTPVC
SPSERANIDALLTKLCSPDLEEQRSAAAELRLLAKRNAHNRLCIAEAGAIPLLLSLLASS
DLRTQEHAVTALLNLSIHEDNKASIMSSGAVPSVVHVLKNGSMEARENAAATLFSLSVVD
AYKVIIGGTGAIPALVVLLSEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLV
TNPTGALMDEAMAILSILSSHQEGKAAIGAAEPVPALVDLIGSGSPRNRENAAAVMLHLC
CGEQQLVHLARAHECGIMVPLRELALNGTDRGKRKAVQLLERMSRFLVQQQEEHESHSRL
QAALVQVLPEAPVQVQEGEIPDQLDSPVPQYPVLL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaccgcgaggaggacgaggagggggagggggtggccctggcgccgcgcccg
gccacggcgacggagcgggtggccaaggcggtggacgccgccacgacctgctccaccgcc
ggggagtaccgcaacgcgtacaagcggccgttgctggcgctgtcccgcaggattcgcctc
ctcggccccttcgccgaggagctccgcgagcgccgtgcccctgcggagaaggaagaggat
ggggaggagaagacgctggcgccgctcgccgacgcgctggagaaggcgctcgacctgctc
cggctcggccgcgaggggagcaggatctccttggtttttgagagggacagggtaatgaag
caatttcaggaagtaattgctcagttggagcaagcattgtgcgattttccgtgcaatgaa
ctggatatatcagatgaagttagagagcaggttgagttagtgcatgcacagctcaaaaga
gcaaaagaacgggttgatatgccggatgatgagttctacaatgacttattatctctgtat
aacaagacctatgacccaagtgcagaacaggctatccttgaaaggttgtcagaaaagcta
cacctgatgactatcattgatctcacacaagaatcacttgctctgcatgagatggtggca
tccggtggtggccaggatccaggagagcatattgagaagatgtcaatgctactgaagaaa
atcaaggactttgtgcaaacccgcaatcctgagatgggccctcctatggtttccacagta
atggattccaatggggaacagaaatctatagccgttcctgatgaattccggtgtccaatt
tccctcgagctaatgaaagatccagttattgttgctactggccagacgtacgagcggaca
tgcatcgagaaatggctagcatctggtcaccatacatgcccaactacacaacaaaggatg
gcgaacacgacattgacaccaaactatgtccttagaagtctcatctctcagtggtgtgaa
acgaatggggttgaaccgcccaagcgctcatcccagcctgacaaaccgacaccggtatgc
tctccaagtgaacgtgctaacattgatgctcttttaaccaagttatgctctccagacctg
gaggagcaaaggtcagctgctgcagagcttcgcctcctagcgaagcggaacgctcacaac
cgactttgtattgctgaggctggtgcaattcccttactattgagtttgctcgcctcatct
gacttgcggactcaggaacatgctgttactgcacttctgaacctctccatacatgaggac
aacaaggcaagcatcatgtcctctggtgctgtgccaagcgttgtccatgtgctgaagaat
ggcagcatggaggcccgggaaaatgctgcagccacactttttagcctctctgtggttgat
gcatacaaagtgattatcgggggaacaggggctatccctgcccttgtagtgttgctaagc
gagggcagccagcggggaaagaaggacgcggcagcagccctcttcaacttgtgcatttac
caagggaacaagggccgcgcgatacgagctggccttgtgccactaatcatgggtctggtg
accaaccctacaggagctctcatggacgaggctatggcgatactctcgatactatccagc
caccaagagggcaaagcagccattggagctgcagagcctgttcctgcgcttgtggacttg
atcggaagcgggtcaccgagaaacagagagaatgctgcggctgtgatgctgcatctgtgc
tgtggggagcaacagctcgtgcatttagcccgtgcacatgagtgcgggatcatggtcccg
ttgcgggagctggcactgaatggcaccgatagagggaagaggaaagcagttcagctgctc
gagcggatgagcagattcctggtccaacaacaagaggaacatgaatcccattcccggctg
caggcggccttggtgcaggtcctccctgaggcccctgtacaggtccaagaaggcgagatc
cccgatcagctggacagtccagtgcctcaataccctgtcttgttatga
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