Brachypodium distachyon (stiff brome): 100840652
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Entry
100840652 CDS
T01717
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00906
Carotenoid biosynthesis
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Module
bdi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
100840652
Enzymes [BR:
bdi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
100840652
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Thi4
HI0933_like
Pyr_redox_2
GIDA
FAD_binding_3
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
100840652
NCBI-ProteinID:
XP_003575945
UniProt:
I1IKZ2
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Position
4:16623093..16627728
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AA seq
585 aa
AA seq
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MPLLLSPHAAARSPSLRHAPCVLLPSRVRPLGAKPRGVGKGRAAVVSEKLAAAVEGEGRS
GDGEGERYDAIVVGSGIGGLVAATQLAAKGARVLVLEKYVIPGGSSGYYRRDGFTFDVGS
SVMFGFSDKGNLNLITRALEAVGCKMEVIPDPSTVHFHLPGDLSVLVHREYDDFVKELVS
KFPHEKEGILKFYGTCWKIFNSLNSLELKSLEEPLYLFGQFFKKPLECLTLAYYLPQNAG
DIARKFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAV
SLANGLVNMGSEIRYKANVTNVILESGKAVGVRLSNGKELFARTVISNATRWDTFGKLVK
VKELPEEEKNFQKNYVKAPSFLSIHLGVKASALPAGTDCHHFVLEDSWSNLEKPYGSIFL
SIPTVLDPSLAPDRHHILHIFTTASIEDWEGLSRKDYEQKKEVVANEIIRRLEKKLFPGL
EDSIILKEVGSPKTHRRFLARSDGTYGPMPRGKPKGLLAMPFNTTSIEGLYCVGDSCFPG
QGVIAVAFSGVMCAHRVAADIGLEQRSPVLDTGLLGVLRWLRTLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcctcctgtcgccccacgccgcagcgaggagcccgagtctccgccacgccccg
tgcgtcctcttaccctctcgcgtccgtcctctcggcgctaagccccgcggtgtcggcaag
gggagggccgcggtggtgtcggagaagctggcggcggcggtggagggggaggggaggagc
ggcgacggggagggggagcggtatgacgcgatagtggtcgggtcggggatcgggggcctg
gtggcggcgacgcagctggcggcgaaaggcgcgcgggtgctggtgctcgagaagtacgtc
atcccggggggcagctccgggtactaccgccgcgacggcttcaccttcgacgtcggctcc
tccgtcatgttcggcttctccgacaagggaaacttaaatttgattacgcgagcactagaa
gcagttggctgtaagatggaagtcatacctgatccttctacggttcatttccatctacct
ggtgatctctccgttcttgtgcatagagagtatgacgacttcgtcaaagagctggttagc
aaattccctcatgaaaaagaaggaatcctaaaattctatggcacatgttggaagatcttc
aattcattaaattctttggaactaaagtccctggaagaaccactataccttttcggacaa
ttttttaagaaacctctggaatgcttgactcttgcatattatctgccacagaatgctggg
gatattgctcgcaagttcataaaagatcagcagttactatccttcatagatgctgagtgt
tttattgtgagcacagtcaatgccttgcaaacacccatgatcaacgcaagcatggtcttg
tgcgataggcacttcgggggaattaactatccagttggtggtgttggtggtattgcggtg
tccttggctaatggccttgttaacatgggcagcgaaatccgttacaaggcgaatgtgacc
aatgttattcttgaaagcgggaaagctgttggagtgaggttatcaaatgggaaggagtta
tttgctagaacagtgatatccaatgccacgagatgggacacatttggaaaactcgtgaaa
gttaaggagcttccggaggaggagaaaaacttccagaagaattatgttaaggcaccgtct
ttcctttccattcatctgggtgtcaaagcctcagcattacccgctggtactgattgccac
cattttgtactggaggatagctggtctaacttggagaagccttatggaagtatattttta
agtatccctacagttcttgatccatcactggcccctgacagacatcacatacttcatata
tttacaactgcaagcatagaagattgggagggtctttctaggaaggattatgagcagaaa
aaagaggttgtggcaaatgagattatacgaaggcttgaaaagaaactgtttcctggtctt
gaagattcaatcatcctcaaggaggtaggatcaccaaaaactcaccgaagatttcttgcc
cggagtgatggcacgtatggacccatgccacggggtaaacccaagggcttgctggcaatg
ccttttaatactacttcaatagaaggactttactgcgttggcgacagttgttttcctggg
caaggtgtaattgctgtggcattttcaggggtcatgtgtgctcatcgagttgcagcagac
ataggtctggaacaaaggtcccctgttctagataccggccttctcggggtcctcagatgg
ttgagaacacttgcatag
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