Brachypodium distachyon (stiff brome): 100840735
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Entry
100840735 CDS
T01717
Name
(RefSeq) SNW/SKI-interacting protein A isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100840735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100840735
Spliceosome [BR:
bdi03041
]
Complex B
Other components
Prp19-related factors
100840735
Complex C
100840735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
100840735
NCBI-ProteinID:
XP_010236089
UniProt:
I1IEZ7
LinkDB
All DBs
Position
3:57636369..57640418
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AA seq
610 aa
AA seq
DB search
MGTLREILPSPKTSASTFYDHSSDPWFKERYGGEPADAAASGKPSGLAKPVPPYGKRTGF
VPRRPEDFGDGGAFPEILVAQYPLGMGRRDEKGGSKILALTVDAHGSVAFDAVVKQGENA
SKIVYSKHSDIVPKIATADSEAVEDEEYEKQIEETTERTKAALEKVVNVRLSAAQPKNVP
THDSESKFIKYKPSQQSAAFNSGAKERIIRMSEMASDPLDPPKFKHKRVPRASGSPPVPV
MHSPPRPVTVKDQQDWKVPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSE
ALYVAEQKAREAVQMRSKVQRELMLKEKERKEQELRALAQKARMERSGAPPPASMGLPVG
GGNQRERERADDGDADMDLEQPREQRRETREEREARIERDRIREERRRERERERRLEAKD
AAMGKKSKLTRDRDRDVSEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFAADDQYN
IYSKGLFTAQPTLSTLYRPKKDGDSEVYGGDADEQLDKVMKTERFKPDKGFSGASERSGK
RDRPVEFDKQEEHDPFGLDQFLTEVKRGKKAVEKIGGGGTMKASGGGSSTRDDYEGGGSG
RSRINFERGR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggggaccctcagggagatcctcccgtcgcccaagacgtcggcgtcgacgttctacgac
cacagcagcgacccgtggttcaaggagcggtacggcggcgagccagcggatgcggcggcg
tcgggtaagccgtcgggcctcgccaagcccgtgccgccctacgggaagcgcacgggcttc
gtgccgcgccggccggaggacttcggcgacggcggcgccttccccgagatcctcgtcgcg
cagtacccgctcggcatgggccgccgcgacgagaagggcgggtccaagatcctcgcgctc
accgtcgacgcgcacggcagcgtcgccttcgacgccgtcgtgaagcagggcgagaacgcc
tccaagatcgtctactccaagcacagcgacatcgtgcccaagatcgccacggctgattcg
gaagctgttgaagacgaggagtacgagaagcagatcgaggaaaccaccgagcggacgaaa
gcagctctggagaaggtcgtgaatgttcggctctccgctgcccagcccaagaacgtgccg
acgcatgattcggaatcgaagtttatcaagtataagccgtcacagcagtcagcagctttc
aattcaggcgcgaaggagaggatcattaggatgtcagagatggcttcagatcctcttgac
ccaccaaaattcaagcacaagcgagtgcctcgtgcttctgggtcaccgcctgtgccggtg
atgcactcaccaccaaggcctgtgacagtgaaggaccagcaggactggaaggtcccgccc
tgcatttcaaattggaagaatccaaagggttacacgatcccacttgataagaggttggca
gccgacgggagagggctgcaggaggttcaaattaacgataactttgcaaagctttcagaa
gcgctgtatgttgctgagcagaaggccagggaagcagtgcagatgcgttccaaggtgcag
agggagctaatgctaaaggagaaggagaggaaggagcaagagctgagggcacttgcgcag
aaggcgcgcatggagaggtctggtgctccaccacctgcatctatgggtttgcctgttggg
ggtggtaatcagagggagagggagagggctgatgatggggatgcagatatggatttggag
cagccgcgtgagcagcgtagggagactagggaggagagggaagcgaggattgagcgtgat
aggatccgtgaggagcgaaggcgtgagagggagagggagaggaggctggaggccaaggat
gctgcaatgggtaaaaagagtaagctcactagagacagggatcgtgacgtcagtgagaag
attgccctgggtatggcaagcactggaggtgcgaaaggtggggaagttatgtatgaccag
aggctctttaaccaggacaagggaatggactctgggtttgctgctgatgatcagtacaac
atatattctaaagggctcttcacagcgcagcccactctgtcgacactttacaggcccaag
aaagatggtgattctgaagtgtatggcggtgatgcagacgagcagttggataaggttatg
aagacagagaggttcaagcctgacaagggattttctggtgcttcagagaggtctggcaag
agagatagacctgtggagtttgataagcaggaggagcatgatcccttcggtctagatcag
ttcttgactgaggtgaagaggggaaagaaagccgtggagaagattggaggtggaggaacc
atgaaggcaagtgggggcgggtcctcaacgagagatgattacgagggtggaggatctggg
aggtctcgcattaactttgaaagaggccgttga
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