Brachypodium distachyon (stiff brome): 100840825
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Entry
100840825 CDS
T01717
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100840825
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bdi01007
]
100840825
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100840825
Enzymes [BR:
bdi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100840825
Amino acid related enzymes [BR:
bdi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100840825
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100840825
Prokaryotic type
100840825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
100840825
NCBI-ProteinID:
XP_003569739
UniProt:
I1HCM1
LinkDB
All DBs
Position
2:3549189..3556939
Genome browser
AA seq
1043 aa
AA seq
DB search
MEKQLEDERKQKKDQKAREKEEKKLKAKQKEAARLQALAASDGPKKSEKKQRKKGAEDEN
PEDFIDPDTPSGEKKLLAHQMAKQYNPSAVEKSWYAWWESSGNFGADPASSKPPFVIVLP
PPNVTGALHIGHALTVAIEDTMIRWRRMSGYNALWVPGVDHAGIATQVVVEKKLMRERNL
TRHDIGREVFVSEVLKWKDQYGGTILNQLRRLGASLDWSRECFTMDEQRSKAVTEAFVRL
HQDGLVYRDYRLVNWDCTLRTAISDIEVDHLELKEETMLKVPGYGTPVQFGVLISFAYPL
EEGLGEIIVATTRIETMLGDTAIAVHPEDKRYTHLHGRYAVHPFNGRKLKIICDAVLVDP
TFGTGAVKITPAHDPNDFEVGKRHNLEFINILTDDGKINGNGGAQFEGMPRFAARVAVIE
ALKEKGLYKDTKKNEMSLGVCSRTNDVVEPIIKPQWFVSCHTMAKAGLDAVRSRKIEIIP
EQYEQDWYRWLENIRDWCVSRQLWWGHRIPAWYVTLEDDQVNDLGSNNDRWIVARNECDA
ILEAQQKYPEKKFQLNQDPDVLDTWFSSGLFPLTVFGWPDDTADLKAFYPTSVLETGLDI
LFFWVARMVMMGMQLGGDVPFQKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGTTLQDL
LKRLEEGNLDQNELSIAREGKTKDFPEGIPECGTDALRFALISYTSQSDKINLDIKRVIG
YRQWCNKLWNAIRFAMGKLGDHYTPPATVVVSTMPPICKWILSVLNAAIGKTVISLEAYK
FGDATTAIYSWWQYDLCDVFIEAIKPYFFNESQESESARTACRDALWVCLDSGLRLLHPF
MPYVTEELWQRLPQPKDSCRQGSIMVSEYPSVVKEWANDSLEKEIGIVLETLKKLRSLRP
TTDTERRPAFVLCRGQHIAATFQCYQSLAVSLLSSVSSLKILTESDGTPPDCSTAVVNQD
LSVYLQLQGALNAEAELEKLRKKRDEIQKLQLALSQKMDASGYREKAPQSVQDEDLRKLT
ALFEQLEVISEAEKKLDVRDDNA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaacttgaggacgagcggaaacagaagaaggatcagaaggcaagagagaag
gaggaaaaaaagctgaaggctaagcagaaggaggcggccaggctccaggctctagcggct
tcggatgggcctaagaaaagcgagaagaagcaaaggaaaaagggtgcggaggatgaaaat
cccgaggatttcattgatccagacacccctagtggagagaagaaattgcttgcacaccaa
atggccaagcaatataacccaagtgctgttgaaaaatcatggtatgcctggtgggaatca
tcaggaaattttggggcagaccctgcaagctcaaaaccaccctttgttattgttttacca
cctcctaatgtgactggagcacttcacatagggcatgcacttacagtggctatagaggat
accatgatacgctggcggagaatgtcaggctataatgctctttgggttccaggagtggac
catgctggcattgctacacaggttgtagtagaaaagaagctaatgcgtgaaaggaatctg
acaagacatgacataggtcgtgaagtatttgtatctgaggttctgaaatggaaagatcag
tacggtggtactatactgaatcaattacgtaggcttggggcctcacttgattggtcccgt
gagtgttttacaatggatgagcaaagatcaaaagctgtaactgaagcttttgtgaggtta
caccaagatggcctagtttacagagattaccgtcttgtgaattgggattgcacacttcga
acagcaatttctgacatagaggttgaccacctagagcttaaagaagaaactatgctaaag
gtcccaggttatggcactcctgtgcagtttggtgtcttgatatcttttgcctatcctctt
gaagaaggactcggtgagatcatagttgcaacaacaagaattgaaacaatgcttggtgat
acagcaattgctgttcatcctgaggacaaaaggtatacacatctgcatggaaggtatgca
gttcaccccttcaatggacgaaaactcaaaataatctgtgatgctgtgctagtggatccc
actttcggcaccggggctgtgaagattacacctgcccatgacccaaatgactttgaggtt
gggaaacgacacaacctagagttcatcaatatcctcacagatgatggcaagataaacggc
aatggaggtgcacaatttgagggaatgccaagatttgctgctcgggttgctgttattgaa
gcactcaaggaaaagggcttgtacaaggacacaaaaaagaacgaaatgagtttgggcgtt
tgttcaagaactaacgatgtagtggaacctattataaaaccccaatggtttgttagttgc
catacaatggcaaaggcaggtcttgatgctgtaagatccaggaaaattgagattattccg
gaacagtatgaacaagactggtacagatggcttgaaaatatacgcgattggtgtgtttca
aggcaactttggtgggggcatcgtataccagcatggtatgtgactcttgaagatgaccaa
gtgaatgatctgggttccaacaatgaccgttggatagtcgcgagaaatgaatgtgacgct
atactcgaggcacagcaaaagtatcccgagaagaaattccagttaaaccaagatcccgat
gttttggatacttggttttcgtctggtctcttcccactaacagtgtttggttggccagat
gatactgcggatcttaaagctttctaccctacttcagtattagaaactggacttgatatt
ctcttcttttgggtagcacgtatggtgatgatgggaatgcaacttggtggtgatgtgcca
ttccagaaggtgtatttgcatcctatgatccgtgatgcacatggccgcaaaatgtccaag
tcacttggtaatgtcattgatcctcttgaagtgataaatggtacgacacttcaagatctg
ctcaaacgtttggaagaaggcaacctggatcaaaatgaattaagcattgcaagggaaggg
aagacgaaagattttcctgaaggcattcctgaatgtggtaccgatgcactgcgtttcgca
ctgatttcttacacttctcagtctgacaagataaatctggatatcaagagggtgattgga
tatcgacaatggtgcaataaattgtggaatgctattcgttttgcaatgggcaagcttggt
gatcattacactccaccagcaactgttgttgtttctacgatgccaccaatctgcaaatgg
atactctcagtacttaacgcggccattggcaagactgtgatctcattagaagcatacaag
tttggtgatgcaacaactgctatatactcatggtggcagtacgacctatgtgatgtattt
atagaagctataaaaccttacttcttcaatgaatctcaggagtccgaatctgcaagaact
gcttgtagagatgccctatgggtttgcctagactctggtctgcgcctgctccacccattt
atgccttatgtaactgaagaactctggcaacgtcttcctcagcccaaagattcttgcagg
caaggttccattatggtatcagaatatccatctgttgttaaggaatgggcaaatgatagc
cttgaaaaagaaataggcattgtcttagaaactctgaaaaaactcagatctctgaggcca
acaacagatactgaaaggcgacctgcttttgtactttgccgaggccaacatattgctgcc
acttttcaatgctatcaatctctagctgtctctcttctttcatctgtatcatcgcttaag
atcctgacagagagtgatggaactccacctgactgttcaacagctgtggtaaaccaagat
ctgtctgtgtacctccagcttcaaggagctctaaatgcagaagcagagctcgaaaagtta
aggaagaaaagagatgaaattcagaagctgcagcttgccctgtctcagaagatggatgcg
tccggttaccgagagaaggctccacaaagtgtccaagacgaggacttgagaaagctcact
gctttattcgagcaattggaggtcatcagtgaagctgaaaagaaactagatgtgagagat
gataatgcttga
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