Brachypodium distachyon (stiff brome): 100840866
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Entry
100840866 CDS
T01717
Name
(RefSeq) nuclear pore complex protein NUP58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100840866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100840866
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100840866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
REC114-like
CC_CDK5RAP2
WHD_CHMP7_1st
DUF2491
Motif
Other DBs
NCBI-GeneID:
100840866
NCBI-ProteinID:
XP_003559394
UniProt:
A0A0Q3N8K7
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All DBs
Position
1:5311504..5316263
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AA seq
454 aa
AA seq
DB search
MDLNIDLDAVARRLSFSAASLSPSPRPTRHGRFLVTPALSPIAEDPREQQAAATQTPAPP
PPWASSSPWFPPSSPAPHTMTPQTPVTSCPPVAPSQVVPASPSPPSVTSPRRQQSLAEAL
EELERARRAGLEQALVAEYQLKALAAAFVERGEQARQAALQQAWAALQPQPRLYLYTVEG
NPAGYKTKWEELHPVSQEFLLQIEEKIGENRHASEQLDQCSRLYDRSLSYRGFELDSSQI
AQDIGSISTIFEREKASIQSLNAVVEEMMRYTEFAISLFVKLRPGFVKRGAGIANAGFAN
RAGSSGAPAENNQPLTLAQTTHSYCGFVRRPSFFMQHTVDRFEEKVEECCKCIEELEQFI
EMKNDKSYAASLESLPKVMSNTHDYFIHVASKVESLHQYAETMRTRSLNSQRNRGSCNDP
FLEANRKDAPKQESGARIVHPKCPRWLQPKTGSR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaacatcgacctggacgccgtcgcaaggcgcctcagcttcagcgccgcctcc
ctctccccctccccgcggccgactcggcatggaaggttccttgtgacgccggctctctcg
ccgatagcggaggacccaagggagcagcaggcggcggccacgcagacgccagctccgccc
ccgccatgggcttcgtcgtctccgtggttcccgccgtcgtctcctgcgcctcacacgatg
acgccccagacgcccgtgacgtcctgcccgcccgtcgcgccgtcgcaggttgttcctgcg
tctcccagtccgccctcggtaacgtcgcctcggcgccagcagtcgcttgcggaggcatta
gaggaattggagcgagcgcgccgagcggggttggagcaggcgctggtggcagagtatcag
ctgaaggcgcttgcggcggcgttcgtggaacgtggggagcaggcacgtcaagcggcgctg
cagcaggcgtgggcggcactgcagccgcagccgaggctgtatctgtacacggtggaaggg
aatcccgcgggctacaagacgaagtgggaggagctccatccggtgtcgcaggagtttctt
ctacagatcgaggagaagataggggagaataggcatgccagtgagcagttagatcagtgc
agccgcctctacgaccggtcactatcctacaggggctttgaactcgattctagtcagatt
gcccaggatattgggtcaatctccaccatcttcgagagggagaaggcttccattcagagc
ttaaatgctgttgtcgaagaaatgatgcgttacacagaattcgctatatctttatttgta
aagttgaggccagggttcgtcaagagaggtgctggaattgcaaatgctggttttgcaaat
cgtgccggatcttcaggtgctcctgctgagaacaaccaacccttgaccttggcacaaacc
actcattcatattgtggttttgtgaggcggccttctttctttatgcaacacactgttgac
aggtttgaggagaaggttgaagagtgttgcaaatgtattgaagagctagagcagtttatt
gaaatgaagaatgataaatcctatgcagcttctttggaatctcttccgaaagttatgtct
aatacgcatgactattttatccatgttgcatccaaggtggaaagtcttcatcagtatgct
gaaacaatgagaactcggtctctgaacagtcagcgtaacaggggtagctgcaatgatcct
tttctggaggcaaatagaaaagatgcacctaaacaagaatccggagctagaatagttcat
ccaaagtgcccaagatggctgcaacccaaaacaggctccagatga
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