Brachypodium distachyon (stiff brome): 100840927
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Entry
100840927 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase makorin isoform X2
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100840927
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100840927
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100840927
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-CCCH_DUS3L
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-RING_UBOX
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
100840927
NCBI-ProteinID:
XP_003570254
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All DBs
Position
3:complement(53925971..53935043)
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AA seq
363 aa
AA seq
DB search
MSNRSACKFFVHGACFKGDYCQFSHDWNDQSNNVCAFYQNGVCSYGSHCRYEHVEVSYEH
PPPTAAVAASNSYQILSSSGCRICEEDRIVVSNQIQQTCKSASALSAHQPDRREDNNSVP
PRRTTQDQASLPPAHLPMCSSAAAGTCPYGEECPQMHGNLCTTCGKQCLHPYRPSESGVH
IKLCKRNNKWLETLKKSEEIECSVCLDCVLSKSTAAEKRFGLLPECDHAFCITCIRKWRS
SSLTSSMDIDSTVKACPICRKVSYYVIPSSTWYSSKEEKQEIIDGYKAKLKSIDCKYFDF
GRDTCPFGGRCFYKHAYSDGRLEEVVPVAPALPPPRLHFHADDGSREHVRNIGFAYLLSR
LHL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaggtctgcttgcaagttctttgtgcatggtgcttgctttaaaggagattac
tgccaattctcccatgactggaatgatcaatcaaataatgtttgtgcattttaccagaat
ggtgtttgctcctatggtagccattgcagatatgaacatgttgaagtttcttatgaacac
ccaccaccaactgcagcagttgcagcatccaactcttatcagattctcagttcttccgga
tgtcgtatttgcgaggaggacagaattgttgtgagtaaccaaatacaacagacatgcaaa
tctgcatcagcgctctctgcacatcaacctgatcggagagaggataacaacagcgtgcca
ccaagacgaactacgcaggatcaagcatccctcccacctgctcatttgccaatgtgctct
tctgctgcagctggaacatgtccttatggggaagagtgccctcaaatgcatgggaatcta
tgcacaacctgtggaaaacagtgcttgcatccctaccgtcctagtgaaagtggggttcat
atcaagctctgcaagagaaacaacaaatggctggagaccttgaaaaaaagtgaagagata
gaatgtagtgtgtgtttggactgtgtgctttcaaagtcaacagcagcagaaaagaggttt
ggacttctacctgaatgtgaccatgccttctgtatcacatgcatcaggaagtggcgcagc
agctctcttacatcttctatggatatcgactctacagtcaaggcttgtccaatatgccgc
aaggtctcatactatgtcattcctagttctacatggtactcctcgaaagaggaaaaacag
gaaataattgatggttacaaggccaagctcaagtctattgattgtaagtacttcgacttt
ggaagggacacttgcccctttggtggccgttgtttttacaagcatgcctacagcgatggg
cgtttggaagaggtggtaccagtggcaccggcactaccgccaccccggcttcattttcat
gctgacgatggaagtagagagcacgtaagaaatatcggatttgcatacttgctcagtcgg
ttacatctgtag
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