KEGG   Brachypodium distachyon (stiff brome): 100840947
Entry
100840947         CDS       T01717                                 
Name
(RefSeq) ras-related protein RABF1 isoform X2
  KO
K07887  Ras-related protein Rab-5A
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi04144  Endocytosis
bdi04145  Phagosome
bdi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100840947
   04145 Phagosome
    100840947
   04148 Efferocytosis
    100840947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100840947
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdi04147]
    100840947
   04031 GTP-binding proteins [BR:bdi04031]
    100840947
Membrane trafficking [BR:bdi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100840947
 Endosome - Lysosome transport
    100840947
Exosome [BR:bdi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100840947
  Exosomal proteins of other body fluids (saliva and urine)
   100840947
  Exosomal proteins of colorectal cancer cells
   100840947
  Exosomal proteins of bladder cancer cells
   100840947
GTP-binding proteins [BR:bdi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100840947
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase G-alpha AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 100840947
NCBI-ProteinID: XP_003573975
UniProt: I1I4A9
LinkDB
Position
3:28326031..28330916
AA seq 200 aa
MGCSSSLPANNAGGLSNINNENSATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTLALEDSTTVKFEIWDTAGQERYAALAPLYYRGAGAAVVVYDITSAESF
SKAQYWVKELQKHGSQDMVMALVGNKADLHEKRTVSSQDAQEYAERNSMFFVETSAKTAD
NINQLFEEIAKRLPRPTPPS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgctcctcgtctctgccagctaacaatgctggaggtttgagcaatatcaacaat
gagaactctgcaactgattcaaagaacttgaaagtgaagttggtgctattgggagattcc
ggagttgggaaaagctgcattgttcttcgctttgtccgtggtcagtttgaccccacatca
aaggtaactgttggtgcatcatttctgtcacaaacattggcacttgaggactccacaaca
gtaaagtttgaaatatgggacactgctggccaggagaggtatgctgcattagcacctctt
tactacaggggagctggtgctgcagttgttgtctatgacataacaagtgcagagtcattt
agtaaagctcaatattgggtgaaggaacttcaaaaacatggtagccaggatatggtcatg
gctttggttggaaataaggctgatctacatgaaaaacgcactgtatcttctcaggatgca
caggagtatgcagaaaggaacagtatgtttttcgttgagacatcagcaaaaacagcagat
aatataaaccaactattcgaggaaatcgcgaagaggcttcccaggccaacaccgccatcc
tga

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