KEGG   Brachypodium distachyon (stiff brome): 100840962
Entry
100840962         CDS       T01717                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03020  RNA polymerase
bdi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100840962
  09124 Replication and repair
   03420 Nucleotide excision repair
    100840962
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdi03021]
    100840962
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100840962
Transcription machinery [BR:bdi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100840962
  RNA polymerase III system
   RNA polymerase III
     100840962
  RNA polymerase I system
   RNA polymerase I
     100840962
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100840962
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 100840962
NCBI-ProteinID: XP_003577067
UniProt: A0A0Q3HFU7
LinkDB
Position
4:46839373..46842388
AA seq 306 aa
MFQAPVKLAALRNGKTPKPCRTQPRAPLSQEINSKEMDQPMPSSQRSSPSIASAESTAAS
STAPMPKGAPARVPAAAAAAAFDDVDEVPEVVEWMASMVDRGGRASHEVHSLFLARRTAL
EMLRDRGYSVPEPELARTLTEFRAWWAEKPEMRRLSFSATFASDHSNKVQFVFCPPKPVN
ITTIREVYSQIEEENLSRLILILQGDITSKARDCIKEIFPFKVDIFQVTELLVNISKHEL
KPKHEVLTAEEKAELLKKYNLEDSRLPCMLENDAVARYYGLGKGTIVKITYDGELTGHHV
TYRCIF
NT seq 921 nt   +upstreamnt  +downstreamnt
atgttccaggcgcccgtgaagctggcagctctccgaaacggcaaaaccccaaaaccgtgc
agaacacagcccagagctccactctcgcaagaaataaatagcaaggaaatggatcagccg
atgccctcctcccagcgatcgtccccctcgatcgcctcagcggagagcaccgccgcctcc
tccactgcgccgatgccgaagggtgcccctgctcgcgtccccgctgccgccgccgctgcc
gcgttcgacgacgtcgacgaagtccccgaggtcgtcgagtggatggcgtcgatggtcgac
cgcggcggccgcgccagccacgaggtccacagcctgttcctggcccggcgcacggcgctg
gagatgctccgcgaccgcgggtacagcgtgccggagcccgagctcgcgcgcacgctcacg
gagttccgcgcgtggtgggccgagaagccggagatgcggcgcctctccttctccgccacc
ttcgcctctgaccactccaacaaggtgcaatttgtattctgcccacccaagcctgtcaac
atcacaaccatccgagaggtgtattcccagatcgaagaagagaacttgtctagacttatt
ctgatattgcagggagatataacgtctaaagctagagactgtatcaaggagatcttccca
tttaaagtagatatattccaggtcacagagttactggtaaacattagtaagcatgaactg
aagcccaagcatgaagtgttgactgcagaggaaaaggccgagcttctgaagaagtacaat
ttggaggattcaaggctcccttgcatgctagagaacgatgcagttgctcgctactatggc
cttggcaagggaaccattgttaaaattacatatgatggcgagcttacagggcatcatgtg
acttaccgatgcattttctga

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