Brachypodium distachyon (stiff brome): 100840966
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Entry
100840966 CDS
T01717
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100840966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100840966
03036 Chromosome and associated proteins [BR:
bdi03036
]
100840966
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100840966
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100840966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
100840966
NCBI-ProteinID:
XP_003577292
UniProt:
A0A0Q3H292
LinkDB
All DBs
Position
4:complement(11635202..11645940)
Genome browser
AA seq
1093 aa
AA seq
DB search
MEVDPSPSASPRRPLPTPGYLDLESSRLREEYRRYRKRLSSSNDSPLLGTSVSRFSEARV
LRDGNSIHRQPNAGLLLEEIKQEASDYSDIDGLDGSKLFGSAKRRTSLDGGSAPDTDFSS
GRKAARSAFNPVKLEGDVPQEGETTFTIFASLLDSAIQGLIPFPDAILQFERACRNASES
IRSATTGKLRMVDDKLMQQKAQLLLDEAASWSLLWYLYGKGNEEFPEELFVSPTTSHQES
CRFVATDLTAQLCLRIVLWLEGLASEGLDLEKKVRGSHVGSYLPSSGVWHRTQRYLKRKN
NDDSTIVKHVDFDAPTREGAQLLPDDKKQGELLLEDIWTLLRAGRLEEACELCRSAGQAW
RAATLCPFGGIDLFPSLEAMLKNGKARTLQAIELESGVGRQWRLWKWASYSASEKIAEHD
GGRYEMAVYALQCSNLKRTLPICTDWESACWAIAKSWLDVQVDLELSQYQTSRPEEKQFD
DDMNGTQPMVSSAGPENWPHHVLDQQPRDIAALLQKLHSSDLVHETVSRACREQHRQIEM
NLMSGNIAHLLDLLWSWVSPSEEDQNILRSRDDPEMIRFGAHIVLVLRYLFGEEMEDEFE
EKLVTVGDLIINMYVRYLFSEQQEELVGVYASQLERDVCIDLFVEMMELRLNSSLHTMYK
LFLSAVEYLPFSSGDASKACFEEIIERVLSRSREMKPSKYDEDFSDVAERHHLQALQKAM
VIQWLCFTPPSSIPGFQMITGKLLIRALMHSNTLFREFSLISMRRVPELPIGPHKLLAIL
AEPLKQKENLFSFEDQEVSDNLREFEDWHEYYSLDATYRGWLRYEMENSSVPPEMLSAEE
KDQAVAAARQTLELAFLLLLREERPWLNAAEKSPFEWTDTVFLELHATAILCLPSGECML
PDATSCTALTSALYSTVSEQDVLHRQLKVDVKVSSKDPCCIEVALRCLAKEGDGIALHEA
NDGGLLAAIMAAGFKGELNRFQPGVSMEISRLDAWYSDGHGSVECTAAYIIRGLCRRCCL
PETILRSMQASISLSEAGDSLDHCDKLIELVASSDSGLMHLFSQQQLQEFLIFERECFIS
KMELEEEQIPTDG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacccgtcgccgtccgcgtccccgcggcggccgctgccgacgccgggatac
ctggacctggagtcctcccgcctccgggaggagtaccgccgctacagaaagagactatct
tcttcaaatgactccccactgttggggacctcagtctccagattctctgaagcaagggtg
ttgcgtgatggcaacagcatacacaggcagcccaatgctggtctactccttgaagaaatc
aaacaggaggcttctgattattctgacattgatggcttggatggatcgaagctgtttgga
tcagcaaaaagaaggacatcactggatggtggttctgcaccagacacggatttcagttca
ggtaggaaggcggcgaggtcggcatttaatccggtcaagctggagggtgatgtgccacaa
gaaggagaaacaacttttacaatctttgcatcccttcttgattctgcgatacaaggattg
attcccttcccagatgcaattttacaatttgagagagcatgcagaaatgcttcagagtca
ataaggtctgctaccacaggaaagctccgaatggtggacgataaacttatgcagcaaaaa
gcacaactattgctcgacgaagctgcttcttggtcacttctttggtacctctatgggaaa
ggaaacgaggagtttcctgaagagctattcgtgtcaccaactacatcccatcaggagtct
tgccgctttgttgcaacagatcttacagcacaattgtgtctcaggattgtactttggctt
gaaggacttgcttctgaaggtctcgatttggagaaaaaagtgagaggatctcatgttggt
tcatatctaccaagttctggtgtttggcatcgtacgcagaggtacttaaagagaaagaat
aatgatgattctaccatagtgaagcatgtggattttgatgctccgactcgtgaaggagcc
caacttcttcccgatgacaagaagcaaggtgaattgcttttagaagatatctggactctc
ttaagagctggaagattagaagaggcgtgtgaattgtgccggtctgctggacaggcatgg
agagctgccactctttgcccctttggtggcatagatctctttccttccctggaggccatg
ctaaagaatggaaaggctagaacactacaagccattgaattggaaagtggtgttggacgg
cagtggcgtctttggaaatgggcatcatatagtgcttcagaaaaaattgctgaacatgat
ggtggtcggtatgagatggctgtatatgctttacagtgcagtaacttgaagcgtaccttg
ccgatctgtactgactgggagtcagcttgttgggcaattgcaaaatcctggctagatgtt
caagtggatttagaattatctcaataccaaacgagcagaccagaagagaaacagtttgat
gatgacatgaatggaacccagcctatggtcagctcagccggcccagaaaattggccacac
catgttcttgatcagcaacctcgtgatattgctgcacttctgcagaaactccattcaagt
gaccttgttcatgaaactgtttctcgagcatgtcgggagcagcaccgtcaaattgagatg
aatctcatgagtggaaatatagctcatcttcttgaccttctatggtcatgggtgtcaccc
tctgaagaggatcaaaacattttaaggtcccgtgatgatcctgagatgatacgttttggg
gcacatattgttcttgttctgagatacctattcggcgaggaaatggaggacgagtttgag
gaaaagctggttactgttggtgatctcatcatcaacatgtatgtgaggtacttgttttca
gagcagcaagaggagttggttggagtatatgcctctcagcttgaacgtgatgtttgcatt
gatttgtttgtggaaatgatggaactaaggttaaatagcagcttgcataccatgtacaag
cttttcctctctgctgtggagtatctgccattctcatctggagatgcgtccaaggcttgt
tttgaagagataattgagagagttctttcaagatctcgagaaatgaaacctagcaagtat
gatgaagatttttctgatgttgcggaacggcatcacttgcaagcacttcagaaggcaatg
gtcattcagtggctttgcttcacaccaccatcctcaattccaggctttcagatgatcaca
gggaaacttctgatacgggcgttgatgcatagcaacacgctattcagagagttttccctg
atatcaatgaggagagttcctgaattaccaataggcccacataagttacttgccatcctt
gcggaaccattgaaacagaaggaaaatttattttcatttgaagatcaggaggtatctgat
aatttacgagagtttgaagattggcatgaatattactccctggatgcaacataccggggt
tggcttagatatgagatggagaattcttctgttcctcctgaaatgctttcagcagaagaa
aaagatcaagctgttgctgcagcaagacaaacgctggaattggcattcttgttactactc
agggaagaaagaccatggttaaatgccgctgagaaaagtccatttgagtggacagacact
gttttccttgagttgcatgcaactgcaatactctgtctaccttctggagaatgcatgcta
ccagatgcaacatcatgcacggcactgacaagtgcactgtattcaactgtcagcgaacag
gatgtgctgcatcgccagttgaaggttgatgttaaggtttcttctaaagatccttgttgt
atagaagttgcacttcgctgcttggcaaaagaaggtgatgggattgcacttcatgaagcc
aatgatggaggtcttcttgctgcaattatggctgctggttttaaaggtgaactcaatcgt
tttcaacctggagtttcaatggaaatatctcgacttgatgcttggtattctgatggtcat
ggttcggttgaatgtactgctgcttatattattcgagggctttgccgaagatgctgccta
ccagaaacaattttacgatctatgcaggcatctatctcgctttccgaagcaggggattct
ctagatcattgtgacaaactcatcgagttagttgcttcatcagattccggattgatgcat
ttgttcagccagcagcagttacaggagttcctgatttttgagagggaatgcttcatatct
aaaatggagcttgaggaagagcagatacctactgatggctaa
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integrated database retrieval system
