Brachypodium distachyon (stiff brome): 100841028 Help Entry 100841028         CDS       T01717                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism bdi  Brachypodium distachyon (stiff brome) Pathway bdi03018   RNA degradation Brite KEGG Orthology (KO) [BR:bdi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     100841028  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bdi03019]     100841028 Messenger RNA biogenesis [BR:bdi03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      100841028   mRNA degradation factors    5'-3' decay     Decapping complex      100841028 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  100841028 NCBI-ProteinID:  XP_003568134 UniProt:  I1HHS2 LinkDB All DBs Position 2 Genome browser AA seq 863 aa AA seqDB search MAPVQNSKYRKKEREVSKTDGGASHLCLSFLAPSDPKPKRIPRNPNPSTLLALAPPVEMR GLRADGGGGGGTSSSSSTAENSRFDAAQYSFFGKAPLDGLELGGLVDDGGVECYGGGFGG HDDGAYQLSPVGEEIDCMSNLSEIDDLASTFAKLNRSISGTRNRGVIGDRRSISRESSLT NDWVPEADFPNWVDPDMLNNDEFQDSKQLCAQPQYLPQFGESKPLSRTSSYPLEPLQHRS SEPILGHISPSFTSYPPPGGGGLSYPAQGLTRHSSIPSPGAGHQMGSPSSSLSGSPYNMT SVPHGLRYGRSMSYTAADLSANNFLQNEWPNQAGPHTFEHFNQRPGLLQQQLSFPGSSMS SLLFSQQQQRSPLVPPSHHNYLNMQPQFYHHHSPEMIGKFDHVPNLPSPRDKRSRSGRGK HSIRFSQQPSDAAGQNVDNGGIKFRSKYMSSEEIESILRMQHSTSRSDPYIDDYYHQACI AKRSASSQQKINFSPMSIKDFPSKSRSGGDQHSYLQVDAVGRVSFSSIRRPRPLLEVDIP ASGDHKSSARPLEKEPMLAARITVEDGICLLLNVNDIDRFLQSSQAQDSSFQLRRRLKVL LEGLATSLELVDPFGPNKPGDSSGLAPTDDLIFLRIVSLPKGRKLLARYLRLLVPGSELT RIVCMAIFRHLRSLFGGLASDSGAAETTVGLAKTVSSCVQHMELSALSACLTAVVCSSQQ PPLRPFGSSAGDGASLIIKSVLDRATELLADPHSAADYSRSTRSLWQASFDAFFGLLTKY CDSKYGSILQMFSMQGSNSTARSEASKAVSREMPVELLRASLPHTNEQQRQMLLGFARKS MPVTGFNHSGTSSGHFTSESVAG NT seq 2592 nt NT seq  +upstreamnt  +downstreamnt atggctccagtccaaaactccaaatacagaaagaaggaaagggaagtaagcaagacggat gggggagcttcccatctctgtctctctttccttgctccctcagatccaaaacccaagcgc atcccccgaaatccaaaccctagcacactgctcgcgctcgcgccgcccgtcgagatgagg ggcctcagggcggacggcggcggcggtggcggcacctcgtcttcgtcttccaccgcagag aactcgcgtttcgatgcggcacagtattcgttcttcggcaaggcgccgctggatggcttg gagctgggcggtttggtggacgatggaggtgtggagtgctatggcggcggatttggtggg catgatgatggggcttaccagttgtctcctgtgggagaagagatcgattgtatgagtaac ttgtctgaaattgatgatcttgcaagcacttttgcaaagttgaaccgaagtattagcgga acaagaaatcgtggtgttattggtgatagacgatcaatttccagggaaagttcattgact aatgactgggttccggaagcagacttccccaattgggtagatccggatatgctcaacaac gatgaatttcaggacagcaaacaactgtgtgctcagccacagtatttacctcagttcgga gagtcgaaaccattgagcagaacatcttcctatcccctggaaccactacagcaccgctcc agtgaacctatccttgggcatatatctccttcgtttacatcctatcccccgccaggtggt ggtggactatcctatcctgcacaaggtcttacacgccactcaagcattccttcacctggc gctggtcaccaaatgggttctccaagttcatcactttctggttctccatataatatgact agtgtacctcatggactgcgatatggacgaagcatgtcttacactgctgcagatctatca gcaaacaacttcctgcaaaatgaatggccaaatcaagctggtccccatacttttgagcat tttaatcaacggcccggtttattgcagcaacagttatcatttccggggagttcgatgtct tcattgctattttctcagcagcagcagagatcgccactagtcccgccatcccatcacaat tacctaaacatgcagcctcagttctatcaccatcattctccagaaatgataggcaagttt gatcatgttcctaatttgccttcaccaagagacaagagatcaaggtcaggaagaggaaaa cacagcatacgcttttctcaacaaccttctgatgcagctggtcagaatgttgataatgga ggaataaagttcagatcgaaatatatgtcttccgaagagatagagagtattttaagaatg cagcactccacaagtcgcagtgatccgtacatcgatgactattaccaccaagcttgtata gccaaaagatctgccagttctcagcagaagatcaacttctcccccatgtcaataaaagac ttcccatcaaagtcccggtctggtggtgatcaacattcatatctacaggttgatgctgtt ggaagagtatcgttctcttccatacgtaggcctcgccctcttctcgaagtagatattcct gcatctggtgatcacaagtcatctgcgaggccactggagaaagagccaatgctggcagcc agaattactgttgaagatggtatatgtcttcttctaaatgtaaatgatattgaccgcttc ttgcagtctagccaggcgcaggacagcagcttccaactgaggcgaaggcttaaggtcctc cttgaaggcttagctacatcactcgagcttgtggacccttttggcccaaacaaacctggc gattcatctggattggcccctacggatgaccttatttttctccgcattgtttctcttccg aaaggacgtaagcttttggcacgttatcttcgacttcttgtccctggaagtgagctgacc cggatagtgtgcatggctatctttcgacatcttaggagcttgtttgggggtttagcgtca gattctggtgctgcagaaacaacagttggtcttgccaagactgtttcctcgtgcgtgcaa catatggaactaagcgccctcagcgcgtgcctcactgctgttgtctgctcatcgcaacag ccacctctccgcccttttggcagctctgctggtgatggggcttctctaatcatcaaatca gtactggatagagcaactgaactgttagctgatcctcattctgcagccgactacagcaga tcaactcgttctctttggcaggcatcatttgatgctttctttggacttctgacaaaatac tgtgacagcaagtatggaagtattctgcagatgttcagcatgcagggatccaattctacg gctagatctgaagcctcaaaggcagttagcagggagatgcctgttgaactgctccgtgca agccttccacataccaatgaacagcaacgccagatgcttcttggctttgctcggaaatcc atgcctgtaactggttttaaccattccgggacgagcagtgggcattttacttctgaatct gttgccggttaa

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