Brachypodium distachyon (stiff brome): 100841146
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Entry
100841146 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100841146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100841146
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100841146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
DbpA
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
100841146
NCBI-ProteinID:
XP_003573649
UniProt:
A0A0Q3F045
LinkDB
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Position
3:complement(1328675..1332448)
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AA seq
277 aa
AA seq
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MRPIFCGNLDYDARQSEIERLFSKYGRVERVDIKTGFAFVYMEDERDAEDAIHRLDRTDF
GRKGRRLRVEWTKEDRSGGRKGNPKRSPTSVKPTKTLFVINFDPISTRTRDLEKHFDQYG
KIANIRIRRNFAFVQYESQEDATKALDGTNGSTLMDRVISVEYALRDDDEKRNGYSPERR
GGRDRSPDRRDNRGRSGSPYGRGRERGSPDYGRGRERGSPDYGKGGARGSPDYVRGGSPY
AGKGDERRSPKYDRERREASPGYDRPRSRSPAREDRD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaattttctgtgggaaccttgactacgatgctcgccagtctgaaatcgagcgt
cttttcagcaagtatggaagggtggagcgtgttgacataaagacaggatttgcgtttgtc
tacatggaagacgaacgtgatgctgaagatgctattcacagacttgacagaactgacttt
ggcagaaaagggaggagacttagagttgagtggacaaaggaggatcgcagtggtggtcga
aaaggaaatcccaagagatctccaaccagtgtgaaaccaaccaaaaccttgtttgtgatt
aactttgatccaatcagcacaagaacaagagatctggagaaacactttgatcagtatggc
aagattgcgaatatcagaatcagaaggaactttgcctttgtccagtatgaatcacaggag
gatgctactaaagcactggatggtactaatggaagcaccctgatggacagggtcatctct
gttgagtatgcacttcgtgacgatgatgagaaaaggaacggatacagtccagaaaggaga
ggtggtcgtgatagatctccggacagaagggacaaccgtggtcgctctgggagtccttat
ggtagagggcgggaaaggggcagcccggactatggcaggggcagagagaggggcagcccg
gactatggcaagggtggtgccagaggtagccctgattatgtccgtggtggaagcccgtat
gcgggcaaaggtgatgagaggcgcagccccaagtatgatcgtgaacgccgtgaagccagt
cctggctatgaccggccccgcagccgttcgcctgcaagggaagacagggactga
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