Brachypodium distachyon (stiff brome): 100841222
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Entry
100841222 CDS
T01717
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100841222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100841222
Spliceosome [BR:
bdi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
100841222
Complex B
100841222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_YTH1
RRM_MUD2_C
RRM_10
RRM_ACIN1
DUF4523
xRRM
CHASE8
Motif
Other DBs
NCBI-GeneID:
100841222
NCBI-ProteinID:
XP_003568899
UniProt:
I1HLM8
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All DBs
Position
2:complement(34977698..34981326)
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AA seq
251 aa
AA seq
DB search
MSGEAAVGGGGGEANGVQPNVTIYINNLNEKTKLEELKKSLNAVFSQFGKILEVLAFKTL
KHKGQAWVVFEDVASATEALKRMQDFPFYDKPMKIQYAKTKSDVVAKADGTFVPRERRKR
TDEKPEKKQKREQHHDVSQGTLGMNAYPGAYGAPPLSQLPFGGGPKVMMPEIIVPNNILF
VQNLPHDTTPMMLQMLFCQYQGFKEARMIEAKPGIAFVEYGDEGQATAAMSALQNFKISK
DNLMLITYAKK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaggcggcggtcggcggcggcggcggggaggcgaatggcgtccagccgaac
gtcaccatctacatcaacaacctcaacgagaagaccaaactcgaagaacttaagaagtcc
ctcaatgccgttttctcccagtttgggaaaatccttgaagtgcttgcttttaagaccttg
aagcataaagggcaggcatgggttgtgtttgaagatgttgcatcagcaactgaggctttg
aagaggatgcaagacttccccttctatgacaaacctatgaaaattcaatatgccaagacc
aagtcagatgttgtagcaaaagctgatggcacctttgttcctcgagaaagaaggaagagg
actgatgagaaacctgaaaagaagcagaagcgtgagcagcaccacgatgttagccagggt
accttaggcatgaatgcctatcctggtgcttatggggctcctccactctcccagctacct
tttggtggtggaccgaaggtcatgatgccagagattattgtgccaaataacatcctcttc
gtccaaaatctcccacacgacacgacccctatgatgctgcagatgctcttctgccagtac
caagggttcaaggaagcaaggatgatcgaagcaaagccaggtattgctttcgtggagtat
ggagatgaggggcaggcaacggcagctatgagcgctcttcagaacttcaaaatttcaaaa
gataacctaatgctcatcacatacgcgaagaaataa
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