Brachypodium distachyon (stiff brome): 100841278
Help
Entry
100841278 CDS
T01717
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100841278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdi03032
]
100841278
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100841278
DNA replication proteins [BR:
bdi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
100841278
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100841278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
PHD_Oberon
PHD_2
Motif
Other DBs
NCBI-GeneID:
100841278
NCBI-ProteinID:
XP_003559756
UniProt:
A0A0Q3RNF6
LinkDB
All DBs
Position
1:13557120..13563137
Genome browser
AA seq
1377 aa
AA seq
DB search
MHGSDDDVDYGDDARLFAGVRFALVGFDSVSESQYRSEMARRGGADAGGHGAAGCTHVVV
CGLVYDDPVCAAAREGGKKVVTELWVDDSLDMGALANADRVLYKPQRDLNGIPGSQSLNI
CLTGYQKNRREDIMKMVTLMGANFSKSLVAGTSTHLICYKFEGEKYELAKRVDIKLVNHR
WLEDCLEAWEILPIDNYTKSGWQQEMMETQVEDSEDEAEDVGRGLSHSRVIPRSVPITKI
RTATHVDPDRRTPIRGPTVSTGNAQVGAGGHMDTPKQVIEAEDISKMSIDIRADVQSTHN
TNGVTSSADPEAHDSVHPPVNPSNNEKAPGGHIIGDEAKYGDKRAVDTTASTLSTLNTSG
ATVQADHLVHQPIVTPSTESPLKKTLHSSHTCEKVDQKDDEPVADLAAKVVQSNVQGNVT
LCKVNLTSAGNSAPKNTPVLSYSSRRSRKSVSPGANLNSVHQTASPQSSKTSTLNDELNI
SPSVKSNHKISKHTDAKSLQDKACALAQRKSRFSSVGPITPNGSTDSATGTADSLFSSKE
IASEAAAVSDLVKKSTGSQPVKVDSNINSNATVNLVERQKSGSPKKKLSYRRTSLKLTRS
SEVEKLPESFANEKNLESLAKAKKQPRHEAAVEKGCAISPSVDSELGNTSSSLTLGNLGI
EMGETPQVNNIEVVSPNLQHDKVVSCATTQSGAHKASTSGVKKAGAKRSRNAGNETHTVS
VDGESEAAASKYKHDEVISHEDVEREAEKDCTSPNDAERTTLFPEKSSSSRARNAAANSS
LNENSEMNDVIAASNMKNPQGNINKNHKQLSSGASAHEYKESSSKKVPNATETNDVANVS
RSVKIKMTEAPSADKTKAGSLISSLSGVVPQAYTERLSSNGSANKHEICNPDKGPGKRMR
NAVAKRKVSAAQQHRSGSEPCKTGGVFSSDAEVITSKTAADSSGNANKITVDQDVQNANK
DAMTNADGSFCKDSSKVASKDLQKSKLRSSKRKFLAVVEDGSTNHNKENIQVNANITPKA
KCGNSTKAVQNSKDVLDDPSIREGYDCTTLTMLEPTRFILSGHRLLRKEYRLILRRLKGR
VCRDAHHWTFEATHFIAPELRRTEKFFAAAAAGRWILKSDYLSACNEAGKFVEEEPFEWH
GDGLNNGETISLDSPRKWRQLRQRTGHGAFYGMQIIIYGECISPSLDTLKRAVRAGDGTI
LATAPPYTRFLKPGVSFAIVSAGVPRTDVWVQEFMNHKIPCINADYLVEYVCKPGHPLKK
HILFDMDDLADESLQKLQKAQRDLGAGTEEVTEGGDNTEPSCSACGSNNREGSQLLICSG
GEGNQASCGVAMHVDCWNPHHPEPVPDGEWLCPKCDEHMEPLKKAKKTSRSRVRKRS
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcagcgacgacgatgtcgactacggcgacgacgcgcgcctcttcgccggggtc
cgcttcgcgctcgtcggcttcgactccgtctccgagtcccagtatcggtcggagatggca
cggcgcggcggcgcggacgccggcgggcacggcgcggcggggtgcacccacgtggtcgtc
tgcggcctcgtctacgatgatccggtgtgcgcggctgcgcgggagggcgggaagaaggtc
gtgaccgagctgtgggtggacgatagcctggatatgggagcgctggccaacgctgaccgg
gtactatataagccccagagagatttgaatggtataccaggtagtcagtcgcttaatatt
tgcctgacagggtaccaaaagaacaggcgtgaagacataatgaaaatggttactttaatg
ggagcaaacttctcaaaatctttagtagcaggcacaagcacccatctcatttgctacaaa
tttgaaggtgagaagtatgaacttgctaaaagggtggatatcaaacttgttaatcaccgg
tggttggaagattgcttggaggcttgggaaattcttccaattgataattacactaaaagt
ggttggcaacaagagatgatggaaacacaagttgaggactctgaagatgaagcagaagat
gtcgggagaggcttatcgcatagtagagtcattcccagaagcgtcccaatcacaaaaatt
agaacagcaactcatgttgatcctgatcgccgcacacccattcgtggtcctactgtctcc
actggcaatgctcaggttggtgcaggaggacacatggacactccaaaacaggttattgaa
gcagaagatataagcaaaatgtcaattgacatcagagctgacgtacaaagcactcataac
acaaatggtgtgacaagttctgctgatcctgaggcacatgattctgtccatcctcctgtt
aaccccagtaacaatgaaaaggctccaggaggtcacatcattggagatgaagccaaatat
ggtgataaaagggcagttgatactacagcaagcaccctttctactctgaacacaagtggg
gccacagttcaagctgatcatcttgtacatcaaccaattgtgacaccttctactgaaagt
cccttgaagaaaacattgcactcatcacatacgtgtgaaaaagtagatcagaaggatgat
gaacctgtagctgatcttgctgccaaagttgttcaatcaaatgtgcaaggaaatgtaacc
ttgtgtaaggttaatttaacatcagcaggtaattccgcgccaaagaataccccagtctta
agctactccagtaggcgttctcggaagtcagtctcaccaggagctaatttaaattcagtt
caccaaacagcatctccccaaagttccaagacaagtacactaaatgatgagcttaatatc
tccccatcggtgaagagcaatcataaaattagtaagcatactgatgccaaaagcctgcaa
gacaaagcatgtgcacttgctcagaggaagagcaggttttcttcagtcggtccaataacg
ccaaatggaagcacagactcagcaactggaactgcagatagtctgttctcaagcaaggaa
attgcatctgaagcagcagcagtttctgatcttgtgaaaaaatccactggatctcaacca
gtcaaagttgacagtaatataaacagtaatgctactgttaatcttgtggagaggcaaaag
tctggctcacctaaaaagaagttgagctacagaagaacttctttgaagcttacaaggtct
tctgaagtagaaaaacttcctgaaagttttgctaatgagaaaaatttggagtcactggct
aaagcaaagaaacagccacggcatgaggcagcagttgagaagggatgtgctataagccct
tctgttgattctgaacttggaaacacaagttcgagtctcacacttggaaatctgggtatt
gagatgggtgaaacaccgcaggttaacaacattgaagttgtatctccaaacttacaacat
gataaggtggtttcttgtgcaaccacgcaatcaggtgcccacaaagcatcaacttctgga
gtgaagaaggcaggtgccaagaggtctcggaatgctggcaatgagacacatacagtgtct
gtagatggtgaaagtgaggctgcagcctctaagtacaagcatgatgaagttatttcccat
gaagatgtagaacgagaagcagaaaaagattgtaccagtccgaatgatgctgaacgtaca
acattatttcctgaaaaatcctcaagcagtagagcaaggaatgcagctgccaatagctct
ttgaatgaaaacagtgagatgaatgatgtgatagcggcttccaacatgaagaatccacag
ggaaatatcaacaaaaaccataaacagctttcaagtggtgcaagtgctcatgaatataaa
gaaagctcatccaagaaggtgccaaatgccacagaaacgaatgatgttgcaaacgtgtct
cgatctgtcaaaatcaagatgactgaagcaccatccgctgataaaaccaaggcaggttct
ttgatatcaagtttaagtggggtggtccctcaagcttacactgaaaggctttcaagcaat
ggaagtgctaataagcatgaaatctgtaaccctgataaaggaccaggcaagagaatgcgc
aatgcagttgccaagaggaaggtttctgctgcccaacaacacagatctggtagtgaacct
tgcaaaactggtggtgtcttttcatctgatgctgaagttatcacatcaaagacagctgca
gacagttctggaaatgccaacaagataacagtggatcaggatgtccagaatgctaataag
gatgcgatgacgaatgcagatggatcattttgcaaagattcctcaaaagttgcatcaaaa
gatttgcaaaagtctaaactgagaagcagcaaaaggaaatttttggcagttgtagaggat
ggttctaccaaccataacaaggagaatatacaggtcaatgctaatatcacacctaaagca
aaatgtggaaatagcacaaaagcagtacaaaatagcaaagatgtgcttgatgaccccagt
attagagaaggatatgattgtacaaccttgaccatgttggaaccgacaaggtttatttta
agtggccatcgtctgctgagaaaggagtacaggttgatacttcgacgcctgaagggaaga
gtttgcagggatgcgcatcattggactttcgaagccacacattttattgcacctgagctc
cgcagaactgaaaaattcttcgcagctgctgcagctgggagatggattctcaagtctgat
tacttgagtgcttgcaatgaggctggcaaatttgtagaggaagaaccatttgagtggcac
ggtgatggccttaacaatggtgagacaataagtttggattctccaaggaaatggcgacag
ctaaggcagcgtactggccatggcgccttctatggaatgcagatcattatatatggagag
tgcatttctccatcattagacacgctgaagcgtgctgtaagggctggcgatggcaccatc
ttagcaactgccccgccttacaccaggttcctgaaacctggtgtcagttttgccatcgta
tctgcaggcgtgccaagaacagatgtgtgggtccaggagttcatgaaccacaaaattccc
tgcatcaacgcagactatctcgtggagtatgtgtgcaagcccgggcaccctctgaagaag
cacatcctctttgacatggacgatctggcagacgagtccctgcagaagctacagaaggcc
cagcgagatctcggtgccggcaccgaagaggtgaccgagggaggagacaacacagagccg
agctgttctgcttgtggatcaaacaaccgggaagggtctcagttgttgatttgcagcggt
ggtgagggaaaccaggccagttgcggggtggctatgcacgtggattgctggaacccgcac
catcctgagcctgtgcctgatggtgagtggctgtgccccaagtgtgacgagcacatggaa
cccctgaagaaggccaagaaaacttccagatcacgcgtgcgcaagcgcagttga
DBGET
integrated database retrieval system
