Brachypodium distachyon (stiff brome): 100841327 Help Entry 100841327         CDS       T01717                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism bdi  Brachypodium distachyon (stiff brome) Pathway bdi03018   RNA degradation Brite KEGG Orthology (KO) [BR:bdi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     100841327  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bdi03019]     100841327 Messenger RNA biogenesis [BR:bdi03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      100841327   mRNA degradation factors    5'-3' decay     Decapping complex      100841327 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  100841327 NCBI-ProteinID:  XP_003568135 UniProt:  I1HHS3 LinkDB All DBs Position 2 Genome browser AA seq 806 aa AA seqDB search MRGIRADGDVGGGTSSSSSTAENSRFDAAQYSFFGKAPLDGLELGGLVDDGGVEGYGGGF GGHDDGAYQLSPVGEEIDCMSNLSEIDDLASTFAKLNRTISGTRNPGVIGDRRSISRESS LTNDWVPEADFPNWVDLDILNNDEFQDRKQLCAQPQYLPQFGESKPLSRTSSYPLEPLQH RSSEPILGHISPSFTSYPPPGGGELSYPAQGLTLHSSIPSPGAGHQMGSKSSSLSGSPYN MTSVPHGLRYGRSMSYTAADLSANNFLQNEWPNQAGPHTFEHFNQRPSLLQPQLSYPGSS MSSLLFSQQQQRSPLVPPSHHNYLNLQPQFYHHHSPEMIGKFDHVPNLPSPRDKRSRSGR GKHSIRFSQQPSDTAGQNVDNGGIKFRSKYMSSEEIESILRMQHSTSHSSDPYIDDYYHQ ACIAKRSASSQQKINFSPMSIKDFPSKSRSGGDQHSYLQVDAVGRVSFSSIRRPRPLLEV DIPASGDHKSSARPLEKEPMLAARITVEDGISLLLNVNDIDRFLQSSQAQDSSLQLRRRR QVLLEGLATSLELVDPFGPNKPGNSSGLAPTDDLIFLRIVSLPKGRKLLARYLRLLVPGS ELTRIVCMAIFRHLRSLFGGLASDSGAAETTVGLAKTVSSCVQHMELSALSACLAAVVCS SQQPPLRPLGSSAGDGASLIIKSVLDRATELLADPHSAADYSRSTRSLWQASFDAFFGLL TKYCDSKYGSILQMFSMQGSNSIARSEASKAVSREMPVELLRASLPHTNEQQRQMLLDFA RKSMPVTGFNHSGASSGHFTSESVAG NT seq 2421 nt NT seq  +upstreamnt  +downstreamnt atgaggggcatcagggcggacggcgacgtcggtggaggcacctcgtcctcgtcctccacc gcagagaactcgcgcttcgatgcggcacagtattcgttcttcggcaaggcgccgctggat ggattggagctgggcggtttggtggacgatggaggtgtggagggctatggcggcggattt ggtgggcatgatgatggggcttaccagttgtctcctgtgggagaagagattgattgtatg agtaacttgtctgaaattgatgatcttgcaagcacttttgcaaagttgaaccgaactatt agcggaacaaggaatcctggtgttattggtgatagacgatcaatttccagggaaagttca ttgactaatgactgggttccagaagcagacttccccaattgggtagatctggatatactc aacaacgatgaatttcaggacaggaaacaactatgtgctcagccacagtatttacctcag tttggagagtcgaaaccattgagcagaacatcttcctatcccctggaaccactacagcac cgctccagtgaacctatccttggacatatatctccttcatttacatcctatcccccgcca ggtggtggtgaactatcctatcccgcacaaggtcttacactccactcaagcattccttca cctggcgctggtcaccaaatgggttctaaaagttcatcactttctggttctccatataat atgactagtgtacctcatggactgcgatatggacgaagcatgtcttacactgctgcagat ctgtcagcgaacaacttcctgcaaaacgaatggccaaatcaagctggtccccatactttt gagcattttaatcaacggcccagtttattgcagccacagttatcatatccggggagttcg atgtcttcattgctattttctcagcagcagcagagatcgccactagtcccgccatctcat cacaattacctaaacttgcagcctcagttctatcaccatcattctccagaaatgataggc aagtttgaccatgttcctaatttaccatcaccacgagacaagagatcaaggtcaggaaga ggaaaacacagcatacgcttttctcaacaaccttctgatacagctggtcagaatgttgat aatggaggaataaagttcagatcgaaatatatgtcttccgaagagatagagagtatttta agaatgcagcactccacaagtcacagcagtgatccgtacattgatgactattaccaccaa gcttgtatagccaaaagatctgccagttctcagcagaagatcaacttctcccccatgtca ataaaagacttcccatcaaagtcccggtctggtggtgatcaacattcatatctacaggtt gatgctgttggaagagtatcgttctcttccatacgtaggcctcgtcctcttctcgaagta gatattcctgcatctggtgatcacaagtcatctgcaaggccactggagaaagagccaatg ctggcagccagaattactgttgaagatggtatatctcttcttctaaatgtaaatgatatt gaccgcttcttacagtctagccaggcacaggacagcagcttacaactgaggcgaaggcgg caggtcctccttgaaggcttagctacatcactcgagcttgtggacccttttggcccaaac aaacctggcaattcatctggattggcccctacggatgaccttatttttctccgcattgtt tctcttccgaaaggacgtaagcttttggcacgttatcttcgacttcttgtccctggaagt gagctgacccggatagtgtgcatggctatctttcgacatcttaggagcttgtttgggggt ttagcgtcagattctggtgctgcagaaacaacagttggtcttgccaagactgtttcctcg tgcgtgcaacatatggaactaagtgcgctcagcgcatgcctcgctgctgttgtctgctca tctcaacagccacctctccgccctcttggcagctctgctggtgatggggcatctctaatc atcaaatcagtactggatagagcaactgaactgttagctgatcctcattctgcagccgac tacagcagatcaactcgttctctttggcaggcatcatttgatgctttctttggacttctg acaaaatactgtgacagcaagtatggaagtattctgcagatgttcagcatgcagggatcc aattctatagctagatctgaagcctcaaaggcagttagcagggagatgcctgttgagctg ctgcgtgcaagccttccacataccaatgaacagcaacgccagatgcttcttgactttgct cggaaatccatgcctgtaactggttttaatcattccggggctagcagtgggcattttact tctgagtctgttgctggttaa

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