Brachypodium distachyon (stiff brome): 100841365
Help
Entry
100841365 CDS
T01717
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100841365
Enzymes [BR:
bdi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100841365
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100841365
Prokaryotic type
Methylthiotransferases
100841365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
100841365
NCBI-ProteinID:
XP_003557422
UniProt:
I1H2T7
LinkDB
All DBs
Position
1:complement(53109762..53113316)
Genome browser
AA seq
624 aa
AA seq
DB search
MEDIEDVLGPAGFSGGGAPPGLRLPLSTVAVKPKRRSSRLAQTQQQPEARIPGTQTIYVK
TFGCSHNQSDSEYMSGQLSAFGYAITEEPEGADLWLINTCTVKNPSQSAMTTLISKCKNA
NKPLVVAGCVPQGSRDLKELEGISIIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPSLDL
PKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYSIDGLVDRVKIVVSEGVREIWLS
SEDTGAYGRDIGTNLPNLLSAIVAELPADRSTMLRIGMTNPPFILEHLNEIASVLRHPCV
YTFLHVPVQSGSDAVLKAMNREYTVSEFRMVVDTLCELVPGMQIATDIICGFPGETDEDF
AQTVKLIKEYKLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYQGLE
GKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSMLGTSANVKITSVGRWSVFGEVIEG
SIAAKEVLKQNPAEAQEEYRENHAEEATCSTNSCGSCACSGAENVAQQCGPHRSEDPSDA
PTDCGDATCEEAAQYTLVRRNVERTMKTRESDTGKPVVKDQQVNLANRRVINIDRILWVG
LAVSFATTLALFVLLSYKIFWSSY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatcgaggacgtgttggggccggccggtttttccggcggaggagcgcctccc
gggctccgtctccccctctccaccgtcgctgtcaagcccaagcgcaggtcgtccaggctc
gcacagacgcagcagcagccggaggcccggatcccaggcacgcagacgatatatgtgaag
acattcgggtgctcacataaccagagtgacagtgaatacatgtcggggcagctctcggcg
tttggatatgcaatcactgaagagcctgaaggagctgatttgtggctaattaacacatgc
actgtgaaaaatccaagtcaatctgccatgacaactttaatatcaaaatgcaagaacgca
aacaagccactagttgtagctggatgtgtaccacaaggaagccgggatctgaaggagctt
gaaggtattagcataataggagtacagcagatagatcgtgttgttgaagtagttgaggaa
acattgaaggggcatgaagttcggctattgagtcggaaaacactgccctcacttgattta
cctaaggttcgaaagaacaaatttatcgagattcttcccataaatgttgggtgtttaggt
gcttgcacttactgcaagacaaagcatgctcgtggtcacctggggagttattctatagat
ggcttggttgatcgtgtgaaaattgttgtctcggaaggtgtccgggagatatggttaagc
agtgaagatactggtgcttatggtagggatattggtacaaatcttccgaatctcttaagt
gcaattgttgctgagcttccggcagacagaagcacaatgcttcgcataggcatgacaaat
ccccctttcatactggagcatttgaatgagatagctagtgttttgcgtcatccttgtgtt
tatactttccttcatgttcctgtgcaatcaggaagtgatgctgttttaaaggctatgaat
cgtgaatacactgtcagtgagttcagaatggtagttgatactctctgtgagcttgtccct
ggaatgcaaattgccacagatattatttgtggctttcctggcgagactgatgaagatttt
gctcaaactgttaagcttataaaggaatataagttacctcaagttcacatatcacaattt
tatcccagaccaggaacacctgctgccaggatgaagaaagtgcctagcattgaagtgaaa
aagcgaagtcgcgagttgacctcagtttttgaagctttttcaccataccaagggctggaa
ggcaaagttgagaggatatggatcactgaaatagctaccgatggtgttcatttggttgga
cataccaaagggtatatccaggtccttgtcattgctccagatagtatgttgggcacatcg
gcaaatgttaagatcacatccgtgggaagatggtctgtatttggtgaagtgatagaagga
tctattgcagcaaaagaagtacttaaacaaaatcctgctgaagcacaggaagaatatagg
gaaaatcacgcggaggaagccacctgttctacaaattcttgtggttcctgtgcatgctcg
ggtgcagaaaatgtggcacaacaatgtggtccacaccgatctgaagatccatctgatgca
cccacagattgtggtgatgctacttgtgaggaagcagctcaatatacgcttgtgagaaga
aatgtagagagaacaatgaaaacaagagaaagtgatacaggaaaaccagtagtgaaggat
cagcaagtaaatttagctaataggagagtcataaatattgataggattctttgggttggt
ttggctgtcagctttgccacaacattagccctatttgttctgcttagttacaagatcttt
tggtcctcttattaa
DBGET
integrated database retrieval system
