Brachypodium distachyon (stiff brome): 100841414
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Entry
100841414 CDS
T01717
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100841414
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100841414
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
100841414
NCBI-ProteinID:
XP_010232686
UniProt:
I1HU85
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All DBs
Position
2:complement(55549880..55558709)
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AA seq
1137 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVTDTDIGVSVDSIIFPEVPIALRLSSHLM
VGVVRIYSRKVNYLFHDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFHLDDFE
LPETAFQGDIDHHVSTKEQITLQDNPERTAYSTSEFGLDERFGDGNSSHIGLDLEEELLL
TKDHSIQLESDDGIIIQGRSSVYPTDMDVDDDVDNNPSKIHGAEGYVNMDDGPSHSNLNP
LNTDVPSWSGYNVQTPDLNMLLHNEDGAGPSASYYQPSPFPCDEPASPEFVSAQAPATPG
LMEETVPSRVHESPVLSPQRKASPASNDEVAKVDNVAVPPSDFLHSAAVDANDAVSAEPT
GKVGLVKPVLVESSDGVQEIDSLRQQCAMPQQIQTSNLEVTVEKSVVSTDDIVVSGEMLA
SEATMEGVPLVENTSQLCADTSTEPCMIENPTQFNEEAFGLQGDNLLASNGLAEQNLEAI
PPEMPHVDMASTGFQQNVEAIRFDLQGDNLLASNVLAEQNLEAIPPEMTHVDMASAGFQQ
NIEATPQEMAYNDRPNALSTSEFPERERMLSAPDIEFHQTYDLGQITAEKGITESDGSNK
IGSLTSRKRHLEDSSPVPESATTDKLSSKLHGKRSAEAIPEDNDLLASILVGRRTPGLWL
DSTPLPSKASSLKRPRLGSKTMTPKRKVQMDDAMVIHADIIRQQLISTEDIRRIRRKAPC
TRSEIWMIEKGSLEDDIFHEPIFSCMCKDLNDLQYRTYETVPRLTAHNMELQGQLGMTGT
TSSDINNVDISGAKDSATIADEFHMVLPDGAQLDAMLPETTDLLDATAAFGLQLPSDKHV
NNIEGVTEFLFGDEKEIPLVDKTNADTNISPQVDALDKDRLQDAPADLQRSQDPPLFVLD
DITHDSATMVTDAPDVVLDSSGPACAQAVDNMDGELTGIVQSDINAFENNKEMPTSEITG
LEFTQDASAFPQPTDDENAMSAMGENSGLQENNRESFMDMDNMGHDFALKECSDFGSAIH
GVDTDFLNYDDDVDFDDTNNDEPNPDEFQSHDALSGWSSRTRGVARYLKTLFDEESGLGR
KNIAIDHLLRGKTRKEASRMFFETLVLSTKDYIHVDQPNPFDFVSVKPGPKLLKSDF
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgttctactcgcagttcatcttggccaagaaaggcccccttgggacgatatggattgcc
gctcacttggagcggaagctgcgcaagaaccaggtcacggatacggatatcggtgtctct
gtagattcaatcatattccccgaggttccgattgcactacgattatcaagtcatcttatg
gtaggtgttgtcagaatctattctcggaaggtcaactacctattccatgattgcagtgaa
gctttgctcaagataaaacaagcctttaggtctactgctgttgatctcccccctgaagaa
tcaacagctccttatcattctataacactccctgagacattccatcttgacgattttgaa
ttaccggagactgcatttcagggtgacattgatcatcatgtaagcacaaaagaacagatc
accttgcaagacaacccagagagaacagcatattctacatctgaatttggcttagatgaa
agatttggtgatggcaactcttcacatatcggtttggatttggaggaggaactattgctg
acaaaggatcactcaattcaactcgagtctgatgatggtatcatcattcaaggccgatca
tcagtttatcctactgatatggatgttgatgatgatgttgacaataatccaagtaaaatc
catggcgctgaaggatatgtcaacatggatgatggacctagtcacagcaaccttaatcca
ttgaacactgatgtacctagctggtctggttacaatgtgcagacccctgatttgaatatg
ctattgcacaatgaagatggtgcagggccatcagcctcatactatcaacctagtcccttc
ccttgtgatgaacctgcatcacctgagtttgtaagcgctcaagccccggccacacctggc
ttaatggaagaaacagttccttccagagtgcacgaaagtcctgttctgagtccgcagcga
aaagcttcgccagcaagcaatgatgaagttgcaaaggtagacaatgttgctgtgccgcct
tcagattttctccattcagccgcagtagatgctaatgatgctgtaagtgctgagccgact
ggtaaagttggattggttaagcctgtgctagtcgagtcttctgatggtgtacaggagatt
gattctttgaggcaacagtgtgcaatgcctcaacaaattcaaacctcaaacctggaggtt
actgtggagaagtcagtggtaagtactgatgatatagttgtatcaggcgaaatgctagct
tctgaagcaaccatggaaggtgtgcccttggttgaaaatacttcacaactatgtgctgat
acttctaccgagccatgtatgattgagaatccaacacagtttaatgaggaagcatttggc
ttacaaggggataatttgcttgcttcaaatgggttggcggaacagaacttagaagcaata
ccaccagaaatgccacatgttgacatggcaagcacaggtttccaacagaacgtagaggca
atacggtttgacttacaaggggataatttgcttgcctcaaatgtgttagcggaacagaac
ttagaagcaataccaccagaaatgacccatgttgatatggcaagtgcaggtttccaacag
aacatagaggcaacaccacaagaaatggcatataatgatagaccaaatgccctatcaacc
tcagaattcccagaacgtgagagaatgctgtcagctccagacattgagttccaccagaca
tatgatttggggcagattactgctgaaaaaggaatcaccgaatctgatggaagtaacaaa
ataggtagccttactagcagaaaacgacacttggaggatagctcgcctgttccagaaagc
gcgactactgataagttatctagcaaactacatggtaaaagaagcgctgaagctattcct
gaagacaacgatttactggcatctatcttagttggtagaaggacccctgggttgtggctt
gattcaacaccattaccatctaaggcatcatctttgaaacgcccaaggttgggatcgaag
accatgacacccaagagaaaagttcaaatggatgatgctatggttatacatgctgatatt
atacggcaacaattgattagtactgaggatataaggcgcattcgtagaaaggctccatgt
acccgttctgaaatatggatgattgagaaaggttcactagaagatgatatattccatgag
cccatattttcctgcatgtgcaaggatctaaatgatttgcagtatcgaacctatgagact
gttcctcgcctcaccgctcataacatggagctacaagggcaactaggcatgactggaact
acatcatcagatatcaacaatgttgacatctctggtgccaaggacagtgcaactattgct
gacgaatttcatatggtgctgccagatggagctcaattagatgcaatgctgccagaaaca
actgatttgttagatgctacagctgcttttggtttgcaattaccatctgacaaacatgtt
aacaacattgaaggagtaactgaatttctgtttggtgatgagaaagaaataccacttgtt
gacaaaactaatgctgatacaaacatcagtcctcaagtcgatgcactggataaggaccgc
cttcaagatgctccagctgatttgcagaggagtcaagatccacctctcttcgtgctagat
gacatcacccatgattctgctactatggtaacagacgctccagatgtggttttggatagt
tctggcccagcttgtgcacaagcagtggacaatatggatggggaattgactggcattgtt
caaagcgatattaatgcttttgagaataataaggagatgcccacctctgagattactggg
ctcgaattcacccaagatgcctccgcttttcctcaaccaacagacgacgagaatgccatg
tctgctatgggagaaaattctggcttgcaagaaaataacagggagtcttttatggatatg
gacaacatggggcatgactttgcattgaaggaatgcagtgattttggcagtgctattcat
ggtgttgacacagattttcttaactatgacgatgatgtggattttgacgacacaaataat
gacgagccaaatcctgatgaattccaatctcatgatgcgcttagtggttggtcttctcgt
actagaggtgttgcaagatatctcaagactttatttgatgaagagtctggtctggggaga
aagaatattgccattgatcatctattaagaggaaagactcggaaggaagcatcgaggatg
ttctttgagactttggttctgtcgacaaaggactacattcatgtggatcaacccaaccct
tttgattttgtgagcgttaagccaggaccgaagctcctgaagtcagatttctag
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