Brachypodium distachyon (stiff brome): 100841446
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Entry
100841446 CDS
T01717
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100841446
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
100841446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
100841446
NCBI-ProteinID:
XP_003573012
UniProt:
I1IEH6
LinkDB
All DBs
Position
3:56378740..56390175
Genome browser
AA seq
1618 aa
AA seq
DB search
MDGGHGHGGHGQRQPLSPAISASAVLPHQRQMQLHQHPARPAIADLFTLYLGMNSKQRAE
DPARETANKLQKRVSALSRDLPPRDEQFIPDFEQLRMPFPDQEQLQAVTESVLISFVLQC
SSHAPKSEFLLFATRCLCARGHLRWDSLLPSLLSAVSSVEAPMAQGGAVTVGGPVSSSSS
AIVAPSAPSFHASNPTSPLSAMNTIGSPTQSGIDQPIGANASPIKRTEFSTPGQLGTAAR
GDQSRRGEEISYLHHLSCRIILAGLESSLKPATLAVIFQHMVNWLVNWDQRPHGVDEADT
TQTWRIGRPVHEWMHLCLDVIWILVDEEKCRVPFYELVRSNLQFLENIPDDDALVSIIME
IHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPL
HGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQQSSTPGAVF
SPDMIGEAVADRTIELLRFTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVT
NSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNVSPQ
SILLDFISSSQTLRIWSFNTSIREHLNNDQLQKGKQIDEWWKQMTKASGERMIDFMNLDE
RAMGMFWVLSFTMAQPACEAVMNWFTSAGTDVIQGPNMQPNERIAMMRETCPLSMSLLSG
LSINLCLKLAFQLEDSIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILS
KSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRMFRLAENLCMNL
ILSLRDFFLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMAT
SQHTWSEKTLRYFPPLIRDFLMGRMDKRGHAIQAWQQAETTVINQCNQLLSPSAEPNYVM
TYLNHSFALHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYTMVDVLLHHI
QLELQHGHLVQELLSKAIKNLAFFIWTHELLPLDILLLALIDRDDDPYALRLVINLLERT
ELQQRIKAFCSSCSSEHWLKNQPPKRAELQKALGNHLSWKDRYPPFFDDIAARLLPVIPL
IIYRLIENDATDIADRVLAFYSNFLAFHPLRFTFVRDILAYFYGHLPSKLIVRVLSVLGA
SIKTPFSESFTQYLGPSTICPPQEYFANLLLSLVNNVIPPLSSKSKSHPADASGNAGRTS
FSKPHASAQAGGISNTDGQRAFYQNQDPGSYTQLVLETAAIEILSLPVSASQIVTSLVQL
IAHVQAMLIQSNSGQGMSGGLGQNSGLPTSPSGGGAEAAGGNRANTSASGISANFVSRSG
YSCQQLSVLMIQACGLLLAQLPPEFHMQLYSEAARIIKDCRWLADSSRPVKELDSAVGYA
LLDPTWASQDNTSTAIGNVVALLHSFFSNLPQEWLDSTHTVIKHLRPVNSVAMLRIAFRI
LGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPHVEASEIADIIDFLHHAVMYEG
QGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDLNSSIYAATHPKLVQHPS
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggacggggggcacggacacgggggccacgggcagcggcagccgctgtcgccggcgatt
tcggcctcggcggtgctcccccaccagcggcagatgcagctacaccagcacccggcgcgg
ccggcaatcgccgatctcttcaccctctacctcggcatgaactcgaagcagcgggccgag
gacccagcgagggagaccgcgaacaagctgcagaagagagtatctgctcttagcagagat
ctgcctccccgcgatgagcagttcattccggattttgagcagttgcgcatgccgtttcca
gaccaggagcagttgcaggcagtcacggaatcagttctcatctcatttgttctgcaatgc
agtagccacgctccaaaatccgagttcctgctctttgctacgcggtgcctgtgcgctcgc
ggtcaccttagatgggacagccttcttccatctctacttagtgccgtttcatctgttgag
gcaccaatggcgcaaggtggtgctgtgactgttggtggccctgtatcttcttcttcatca
gctattgtagcgccaagtgctccaagctttcatgcttcaaatcctacgtctcctttgtca
gcaatgaacactataggatctcctacacaatctggtattgatcaacctataggtgcaaat
gcgtcacctattaagagaactgaattctccactcctgggcagcttggtactgcagcaagg
ggtgaccagtctcgcaggggagaagaaattagctatctgcatcacctatcatgtaggatt
attttagctggactggagtccagtttgaagccagctacccttgctgtgatattccagcat
atggtaaactggctggttaattgggaccagagaccgcatggtgtggatgaagctgataca
acgcaaacatggaggattggaaggcctgttcacgaatggatgcatctatgcttagatgtg
atatggattttagttgatgaagagaaatgtcgtgttccattctatgagcttgttcgcagc
aacttgcagtttctcgagaatattcccgatgacgatgcactagttagtattattatggag
atccataggaggagggacatggtgtgtatgcacatgcagatgttggatcagcaccttcat
tgcccaacattcggtactcatcggttcttgtcacaatcctacccaagcatagctggagaa
tctgttgctaatctgcgttattcccccattacctatcctagtgtgctgggagagccacta
catggggaggatcttgcgaactctattcctaaggggggtttagactgggaacgtgctctg
cgttgcttaaggcatgctctccgcacaaccccatcaccagattggtggagacgtgttctt
cttgttgctccttgttacagatcacattctcaacaatcatcaacaccaggagctgttttc
tcacctgatatgattggtgaggcagttgctgacaggacaattgaactactaaggttcact
aactcagagactcagtgctggcaagattggcttttgtttgctgacatttttttcttccta
atgaaaagtggctgtattgattttcttgattttgtggacaagcttgcatctcgagtaaca
aatagtgatcaacagattctacgcagtaatcatgtcacctggttgcttgcacagattatc
cgcattgagattgtgatgaatacacttagttcagacccaaggaaggttgaaacaacacgg
aagataatttcgttccataaagaagacaagagccttgatcctaataatgtcagtcctcaa
agtattcttcttgatttcataagtagcagccaaactttgcgcatctggtctttcaacact
tcaattagagagcatttgaacaacgatcagcttcaaaaaggcaaacagatagatgagtgg
tggaaacagatgacgaaagcttcaggagagagaatgatagattttatgaacttggatgaa
cgggccatgggtatgttttgggttctctctttcaccatggcacaaccagcatgtgaagca
gtcatgaactggtttacgtcagctgggacagatgtcattcagggacccaatatgcaacca
aatgaaagaatagcgatgatgcgtgaaacctgccctttgtcaatgtcgttgctttccggg
ttgtctatcaacctgtgtttaaagcttgctttccagcttgaagattcaatatttcttggc
caggctgtccctagcattgctatggtggaaacctacgtaaggttactgcttataacacct
cattcattgttccgtccacattttacgacactaacccaaagatcaccgtctatcctgagc
aaatccggcgtgtccttgctcctacttgagatactgaattacaggctacttcctttgtac
aggtatcatggaaaaagtaaggcgttgatgtatgatgtcacaaagataatatcaatgatc
aaggggaaacgtggggagcatcgcatgtttagattagctgaaaatttgtgcatgaactta
attctgtcactgagagacttcttcttggttaaaaaagagttgaagggaccaactgagttt
actgaaacacttaaccgcataacaattataagccttgctatcactatcaagacacgtgga
attgctgaggttgaacacatgatttatcttcaaccactgttagagcaaattatggcaact
agccagcatacatggtcagaaaagactctacgttatttccctcctctcattcgggatttc
ttaatggggaggatggataagaggggacatgctatccaagcatggcagcaggccgaaact
actgttattaatcagtgcaatcagctactctcaccatctgctgagccaaactatgtcatg
acttatttgaaccacagtttcgctctgcatcgtcaatatctttgtgctggtgcttggatg
ctaatgaatggacatcttgagatcaacagtgcaaatcttgctcgtgtcttgagagagttt
tcacctgaagaagttacggcgaatatttatacaatggttgatgttcttctgcatcatatc
caacttgagcttcaacacggccatttagtgcaggaattactttccaaagcaatcaaaaat
cttgcattctttatctggacacatgagctacttccactggacattctgctgctagcactt
attgacagggatgacgatccttacgctttacgtcttgtgataaatctgcttgaaagaacg
gaacttcagcagagaattaaagcattctgcagttcttgttcttctgagcattggctcaaa
aatcaacctccaaaaagagctgagctccagaaagctcttggcaaccatctttcatggaag
gaccgctacccgccctttttcgatgacattgctgcccgcttgcttccagtcatcccactg
ataatttataggcttattgagaatgatgctacagatattgcagatagggttctcgcattt
tattccaactttcttgccttccacccactaagatttacatttgtgcgtgacattcttgca
tatttctatggccatcttccaagcaagttaattgttagggtcctcagtgtgctgggtgct
agcatcaagactcctttctccgaatcctttactcaatatttaggaccttcaactatttgc
ccaccacaggagtactttgccaacctcttgctaagccttgttaataatgtcatacctcct
ttgagtagcaagtccaaatcacatccagcagatgcttctggcaatgcagggcgcacaagt
ttcagcaagccacatgcatccgctcaagctggtggaattagtaatactgatggtcagagg
gcattttatcaaaatcaggaccccgggtcgtatacacaacttgttttggaaacagcagct
attgagatcctctcacttcctgtgtcggcttctcaaatagtgacctctctagttcaatta
atagcgcatgtacaagcaatgcttatacagtcaaattccggtcaaggaatgtctggtggt
ttggggcaaaattctgggctgccaacttctccttcaggtgggggtgctgaggctgcaggt
ggcaatcgagcaaacacttctgcaagtggaataagtgctaactttgtttctagaagcggt
tactcttgccaacaattgtctgttttgatgattcaagcatgtggcctcttgcttgcacaa
ctcccaccagaatttcatatgcaactatactccgaagcagctcgcatcataaaagattgt
cgttggcttgctgacagttcgagacctgttaaagagcttgactctgctgttggttatgca
cttctggacccaacatgggcttctcaagataatacatcgacagccataggtaatgttgtt
gcccttcttcattcattttttagcaatcttccacaagagtggctggactctacccatacc
gtcatcaaacatcttcgaccagttaattcagttgccatgttgagaatagcgttccgcata
ttgggccccttgttgcctcgtctagcctttgctcgacctctattcatgaagacgttggct
ttgctgttcaatgtgttgggggatgtgtttgggaagaattcgcaagcctcacctcatgta
gaggcttcagaaattgcagacatcattgacttcttgcatcatgcagtcatgtatgaaggt
caaggcggccctgttcagagcactagcaaacctaaactggagatattgacgttatgtggg
aaagtaatggaaattctgaggccggatgtgcagcatcttctctcccacctgaagactgat
ctaaactcttcaatttatgcagcgactcatccaaaactagttcaacacccgtcctaa
DBGET
integrated database retrieval system
