KEGG   Brachypodium distachyon (stiff brome): 100841511
Entry
100841511         CDS       T01717                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03013  Nucleocytoplasmic transport
bdi03015  mRNA surveillance pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100841511
  09122 Translation
   03013 Nucleocytoplasmic transport
    100841511
   03015 mRNA surveillance pathway
    100841511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100841511
   03041 Spliceosome [BR:bdi03041]
    100841511
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100841511
    TREX complex
     100841511
Spliceosome [BR:bdi03041]
 Complex C
  Other components
   EJC/TREX
    100841511
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100841511
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 RRM_9
Other DBs
NCBI-GeneID: 100841511
NCBI-ProteinID: XP_003563990
UniProt: I1GZ84
LinkDB
Position
1:42379908..42384761
AA seq 311 aa
METSLDMSLDDMIKNRSGRGRGRTGVRGQRGGRGRGDGQNLGRGDGQRLGRGFGRGRGAG
TFRGRGLRVPAQRPLGVNTRSSSYAIAKSFNKTKDFAWTHDRFEDSMVAAGLSGIESGTK
LYISNLHYGVTKEDLQELFSEMGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVQALKRYN
NVRLDGKEMKIEVIGANLGLAAVSAPRVNVIPGVKGRGQREVVMMPRTSAFGRGAADSSN
FLPGWKRNSFAQRGGQARGRGRGRGRGRGLGRGIGRGHGRGVYVRKGPSEKSAEQLDKEL
DTYHSGAMNVD
NT seq 936 nt   +upstreamnt  +downstreamnt
atggagacatctttggatatgtcactggatgatatgattaagaacagaagtgggagggga
agaggaagaacaggggtaaggggccagagaggtggccgaggcagaggcgatggccaaaat
ttaggcagaggtgatggccaaaggctaggccgtggttttgggcgtggacgtggtgctggc
acctttcgtggaaggggactacgggtacctgcacaaaggccacttggtgttaacactcgg
tcgtcttcatatgctattgccaagtcattcaacaaaaccaaggattttgcatggacacat
gatcggttcgaggatagcatggtggctgctggcctttccggaatagaatctggtacaaag
ctatatatttcaaacttgcactatggagtgacaaaagaagatttacaggaacttttttct
gaaatgggtcatttgaagcactgtgctgttcattatgacaacaatagacgcccaactggt
tcagctgaggtgatattcactaggaggagtgaagctgttcaagcactgaagcgatataat
aacgtgcgccttgatggaaaggaaatgaagatcgaagtgataggagcaaatttgggtttg
gctgctgtttcggcaccccgtgttaatgttattcctggtgtgaagggcagaggacagaga
gaagttgtaatgatgcctcgtacaagtgcatttggtcgaggtgcagctgactcatctaat
ttccttcctgggtggaagcgcaacagttttgctcagagaggaggacaagcccgtggtcgt
gggcgtgggcgtgggcgtgggcgtgggcttgggcgtggcatcgggcggggtcacggacgt
ggcgtctatgtgcggaaggggccttcggagaaatcagctgaacaattggacaaggagctg
gacacctatcattcaggagcaatgaatgttgactaa

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