Brachypodium distachyon (stiff brome): 100841714
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Entry
100841714 CDS
T01717
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100841714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100841714
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
100841714
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
100841714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
HIRAN
FAN1_HTH
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
100841714
NCBI-ProteinID:
XP_010227976
UniProt:
A0A0Q3NPB4
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All DBs
Position
1:46872171..46880322
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AA seq
971 aa
AA seq
DB search
MLTGRESLVRLIGRRRRSPLPASLAALLSSSSTSSHQADNAGAGEAAREAAAAGPSTGRS
AGADGASAEWVACPVCGESIRGTDYCVNTHLDICLARGSKRKLTQSTLLDSRFNKTTTIG
PTLDSLNNGYEAENVGLTDEDVSSDRAFFSMNSNTGSSKDSTPALSSGSLHGSLDISKTL
NRCMPSDAILPNIKIAENGDAVEKDSSCMLPTETTSVSIDACTDVDSSTKVAVDTVIVGR
RFHENVELQEGVVITVSRDPQNAKDSDAIKVLYAGSECGQMLGYLPRELAKVLAPLLDAH
FVECKGFVVGLPEQQLGDVPIQLTCEKCNNDNETYSDLIHRQSLWERFLGAIRNGNLQRP
SSARYQANFNMMITDVMANHTHLSSDIETSFLGSFKSLSNDGQRLFVRIYTRKGPWFRVS
SISYREISDVEHAAMELKLAGYIYMLSCTDVPSECEMEEILDVLSVPEMKEILKDLLKVN
TSCTRRPELLSTLLSMYNNGTCTALPKKILKWTGNCIRTSNMADELLWRVQRLFFLNGDQ
DLSSFLLVDLGLVKFPDYTCNICHRIFKERNDLLEYEEAIRVAQLMDESLDNDNMEMVSR
CADLSENRVCTMPTEEDSNLAESPPSFYSCFSSTWVYSKVLTLGVSVYERERRYADAIRI
LKILLSKIASGRRRGYWTLRLSVDLEHIGRPNESLSVAEGGVIDPCVRAGSKIALQKRVV
RLSKPPRRWKVPSYADSLRRNIEEVNIEGRPLNCETGAKSVFYGYDGELCGVEQLALQYY
ADEGGSWQGTHSEGGIWMTIFGLLMWDVIFSEVCDVFQSKFQTAPLDLETDDFYKSRKGL
IESQLKRIQDGLAEEMLITSWELHQGTSCRGINWDRHSMADLRAAVACVGGHRLALLLRH
LALDYRSWSSGMPDLLLWRFNGERGGAEAKLVEVKGPRDQLSEQQRAWIFVLMDFGFDVE
VCKVSLVSKRR
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccgggcgggagagcctggtccgcctaatcggccggcgccgccgctcccctctc
cccgcctccctcgccgcgctcctctcttcctcttccacctcctcccaccaggctgacaat
gcgggagcgggcgaggcggccagggaagcggcggctgctggcccctcgacgggccggagc
gccggcgccgacggcgcgtcagcggagtgggtggcgtgccccgtctgcggcgagtccatc
cgcggcacggactactgcgtcaacacacacctcgatatatgccttgctagagggtcgaag
cggaagctaacacagagcacccttcttgactccagattcaataaaacaacaacaattgga
cccactctagacagcttgaacaatggctacgaggcagaaaatgtggggctgactgatgaa
gacgtatctagtgacagagcattcttctcgatgaatagtaacaccgggagctccaaagat
agcacccccgccttatcatctggctccctgcatggatcacttgacatttccaagacgctt
aatagatgtatgccttcggatgctatcctgccaaatatcaagattgctgaaaatggcgat
gcagtcgaaaaggattcttcatgcatgcttccaacagaaacaacttccgtcagtattgat
gcatgtacagatgtggattctagcaccaaggtagctgttgacactgtcatagtgggccgg
aggttccatgaaaacgttgaactgcaagaaggagtggtcattactgtttcaagagatcct
cagaatgccaaggactctgatgctatcaaggtgctttatgcagggtctgaatgtgggcag
atgcttggatacttgcctcgagagctggctaaagttttggcacctctactggatgcacat
tttgttgaatgcaagggatttgtggttggtttgcctgaacaacagcttggcgatgtgccc
attcagcttacttgtgagaaatgtaacaatgacaatgagacatacagtgatctgatacat
cgacaatccttatgggaaagatttcttggtgctattagaaatggaaatttgcagcgacct
agcagtgcaagataccaagcaaattttaatatgatgataacagatgttatggctaaccat
acacacctgtctagtgatatcgaaacatcatttttaggttcttttaagtcgttatcgaat
gatggccaaaggctttttgtgaggatttacactcgaaaggggccatggtttcgagtgagc
agtatctcataccgggagatatcagatgtggagcatgcagccatggagttaaagttggca
ggttatatatacatgctttcttgcaccgatgttccatctgaatgtgaaatggaagagatt
ctcgatgtactaagtgttcctgaaatgaaagaaatactaaaggacctccttaaggttaac
acaagctgcactcgtcgacctgagcttcttagcacccttctctctatgtacaataatggg
acctgcacagctctaccaaagaaaattttaaaatggacaggaaactgtataagaacctct
aatatggctgatgaacttctttggcgtgtccagaggctcttttttctaaacggtgatcaa
gatctttcatcctttctattagttgatcttggtctggtgaagttcccagactatacctgc
aacatttgccaccgtatttttaaagaaagaaatgatttacttgagtacgaagaggctatt
cgagtggcacagttgatggatgaatctcttgataatgataacatggaaatggtgtcaagg
tgtgctgatttgtctgagaatcgagtatgcactatgccaacagaagaagatagcaactta
gctgaatctcctccatcattctattcatgtttttcttctacttgggtctattcaaaagta
cttacactaggtgtctctgtttatgaacgcgaacgcaggtatgcagatgcaataaggatt
ctaaagatattacttagtaaaattgcttctggtaggcggcgaggatattggacattgagg
ctatctgttgatttggagcatattggtcgcccaaatgagagcctttcagtagctgaaggg
ggagtaattgatccatgcgtccgcgctgggtcaaagattgcactgcaaaagagagttgtg
cgtttaagcaaacctccacggcgctggaaagttcccagttatgctgattctcttaggaga
aatatagaagaggtgaacatcgaaggaaggccattaaattgtgaaacgggagcaaagagt
gtattttatggctatgatggcgaactttgtggggtagagcaattagctttgcagtattat
gctgatgaaggaggcagttggcaaggtacccactcagaaggtggcatatggatgacaatc
tttggccttctaatgtgggatgtaatattttcagaagtgtgcgatgttttccagtctaaa
tttcagacagcccctcttgatttggaaacagatgacttctacaagtcaagaaagggcctt
atagagtcccagttgaaaaggatacaagatggtttggctgaagagatgcttatcacctct
tgggagctacatcaagggacttcctgcaggggtattaattgggaccgacattcaatggcg
gacctacgagctgctgttgcatgcgttggtgggcatcgcttggcattgcttcttcggcat
ctagcccttgattacaggagctggtctagcggaatgcccgatttgctgctatggcgtttc
aacggtgaacggggtggcgctgaagctaaacttgtagaggtcaaaggaccaagggatcag
ctctccgagcaacagcgtgcttggatttttgttctaatggacttcggatttgatgtggaa
gtttgcaaagtgagcctagtttctaagcggcgatag
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