Brachypodium distachyon (stiff brome): 100841786
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Entry
100841786 CDS
T01717
Name
(RefSeq) protein argonaute 18 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100841786
03036 Chromosome and associated proteins [BR:
bdi03036
]
100841786
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100841786
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100841786
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100841786
microRNA pathway
RISC loading complex
100841786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100841786
NCBI-ProteinID:
XP_024310310
LinkDB
All DBs
Position
1:complement(23482422..23489285)
Genome browser
AA seq
1049 aa
AA seq
DB search
MANRGGRGGHDGGQHYGGRDGGGGGGQYYGGRGGGGRGNVEGGDGRGRGYYRGGGDGGGR
RGRGYYQGEGDVRGFYQGRGGDGGRGNQGRGYHGGGEGVIRGRGRGYQGDGDVRGRGRGY
DGGGDRGRGRGRGYQQGGNDYGRGRGGYQQQGGDNYGGGRGGRGGGGYPDWPQPVGPPLA
ERYATEAAQLREKFKAMDISRAEPTFPARPGFGSAGKACIVKANHFFVGLVDKGLHQYDV
TVSPEPTLTGVYRAVMSRLVSEHQHTSLGGRLPAYDGRKTLYTAGQLPFNSKEFEVILSD
NKTGSSGHSRERKYVVAIKHVTLVSLQQLQMLMAGYSTDIPSQALQVLDIVLRDMILNER
SDMGYVVVGRSFFSASIDDPRHLGLGIEGWKGFYQSIRPTQSGLSLNIDMSSTAFVKAQS
VIKFVQDILKKPDLRHVTGPDCQKIKKALKGVRVEVTHRGDVRRKYCISGLAGTARDLRF
QSSTGVSKTVMDYFRETYKLQLRYDFLPCLDVGTTQKPNYLPMEVCNIVPGQRYQKKLDE
NQVSNMMQITCQQPLQREGFIRQTVRCNNYNNTKRANEFGIEVDYEPTSVQARVLPAPML
KYHPSGSDNMCNPSNGAWNMRGKKVVDGARVVNWLCINFCVDLPEADVRRFCNGLSNMCC
NTGLFVNIGGLKLFSADPLKFEANLHNVRNFCQQTRQMSGVQKIDLLLALLPDKNDSLYG
DIKRICETDIGVMSQCCLRKNVLKSSPQFFANVAIKINAKCGGRNSVFANRQASLPVVSA
KPTIIFGADVTHPSALDDATPSIASVVASKDWPEVTKYHGVVRAQGHREELIQGLEDIVR
ELLRSFEKESNRRPEQLIFYRDGVSEGQFKQVLEKEIPEIEKAWKAIYNEEPQITFIVVQ
KRHHTRLFPNNHSDMSSKDSSGNVLPGTVVDRQVCHPTEFDFFLCSHAGIKGTSRPTHYH
VLRDDNKFTADALQSLTNNLCYTYASCTRSVSIAPPVYYAHKLAFRARFYQTQGSDVESV
ASSGSTTQPGAIKALPEIKDEVKRLMFYC
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgagggggacgcgggggccatgacggcggccagcactacggaggccgagat
ggcggcggcggcggcggccagtactacggaggccgcggtggcggcggccgcggcaatgtc
gagggcggcgatggccgtggacgagggtactaccgaggcggtggtgatggtggcggccgc
cgcggccgtgggtactaccaaggggaaggtgatgtccgagggttctaccaaggacgcggc
ggtgatggcggccgcgggaaccaaggacgcgggtaccacggcggcggcgagggcgtcatc
cgtggtcgcgggcgtggttaccaaggggatggtgatgtccgaggccgcggccgcggatac
gatgggggtggcgaccgaggccgaggccgtggccgtggctatcagcaaggcggcaacgac
tacggccgcggccgtggcggctatcagcaacaaggcggcgacaactacggaggcggccgc
ggaggcaggggcggaggaggctacccagattggccccaacccgtcgggcctcccctcgcc
gagcgctacgcgaccgaggcggcccagctccgggagaagttcaaggcgatggacatcagc
cgcgccgagcccacgttcccggcccgccccgggttcggcagcgccgggaaggcgtgcatc
gtgaaggccaaccacttcttcgtcggcctcgtcgacaagggcctgcaccaatacgacgtc
accgtctcgccggagccgactctaacgggcgtctaccgggccgtcatgtcgaggcttgtg
tcggagcaccagcataccagccttggcggccgcctccccgcttatgacggccgcaagacc
ctgtacaccgctggccagctgccgttcaacagcaaggagtttgaggtcatcttgtctgac
aataagacaggttcatctgggcatagcagggaaaggaagtacgtggtggccatcaagcac
gtcaccttggtcagcctgcagcagctgcagatgctcatggctgggtactcgacagacata
ccatctcaggcgctgcaggtgctcgacattgtgctgcgcgacatgattctcaacgagcgg
agtgacatggggtatgtcgtggtaggccggtccttcttctccgcaagcattgacgacccc
aggcatcttggcctgggtattgaaggatggaaggggttctaccagagtatcaggcctacg
cagagcggattgtctctgaacatagatatgtcttcgacagctttcgttaaagctcagtca
gtgattaagtttgttcaagatattcttaagaaacctgatctccgccatgttactggtcct
gattgtcagaagattaagaaagccctcaagggtgtgagggttgaagtgacacatcgagga
gatgtacgcagaaagtactgcatttctggcttagctggtactgctcgagatctgaggttc
caatcatcaactggcgtgtccaagacagtcatggattattttagagagacatacaagctg
caactgcgttatgattttctcccatgcctcgatgttggtacaacacagaaaccaaactat
cttccgatggaggtttgcaacatagttccaggacagcggtaccagaagaagctggatgaa
aatcaggtttctaacatgatgcaaataacttgccaacaaccacttcaacgtgagggattc
attcgtcagactgttaggtgtaacaattacaataataccaaacgcgcaaatgaatttggc
atagaagttgactacgagcctacttctgttcaggctagagttctgcctgctccaatgctg
aagtaccatccttctggatctgacaacatgtgcaacccaagtaatggagcttggaacatg
agaggcaagaaagtcgttgatggtgcccgtgttgtcaattggctatgtataaacttttgc
gttgatttgcctgaggctgatgttcgtcggttctgcaatggactgagtaacatgtgctgc
aatactggactgttcgtcaacattggaggtcttaaactattcagtgctgatccattgaag
tttgaagctaatctccacaatgtccgcaatttctgtcagcaaacacggcagatgtcgggg
gttcaaaagattgacctcctacttgctctattgccagataaaaatgacagcttatatggt
gatattaaaagaatttgcgaaacagacatcggtgtgatgtcacagtgttgtctaaggaag
aatgtcttaaagtcgagtcctcaattttttgcaaatgttgctattaagatcaatgccaag
tgtgggggaaggaactcagtatttgccaatagacaagcaagtttaccggtggtttcagcc
aagccaacgattatcttcggtgcagatgttactcatccaagtgccctagatgatgctacc
ccttccatcgcttctgttgttgcctctaaagactggcctgaggtgactaagtatcatggt
gtggttcgtgcacaaggtcaccgcgaagagctcatccaaggtcttgaggacattgttagg
gaactccttcgttcattcgaaaaagaatctaaccgtaggcctgagcagctgatattctac
agggatggtgtaagcgagggtcagttcaagcaggttctggagaaggaaatcccagagata
gagaaggcatggaaggcaatatacaacgaggagccacagatcaccttcatagtggtgcag
aagaggcaccacacaagactgttcccgaacaatcacagtgatatgagcagcaaggacagc
agtggcaatgttctgccagggacagttgttgatagacaggtctgccacccaacagagttt
gatttcttcctgtgcagccatgctgggatcaagggaacaagccgtccaacacattaccat
gtgctgcgagatgacaacaagttcaccgctgatgcactgcagtcgcttacgaacaacctc
tgctatacgtatgcaagctgcactcgctcggtgtcgattgctcctcccgtctattatgct
cataagcttgctttccgtgctcggttctaccaaacccaaggctcagatgtggagtcggtg
gcaagttcaggcagcacaactcaacccggtgcgatcaaggcacttcctgagataaaagat
gaggtgaaaaggctaatgttctactgctag
DBGET
integrated database retrieval system
