Brachypodium distachyon (stiff brome): 100841930
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Entry
100841930 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X2
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100841930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100841930
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100841930
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
HECT type E3
100841930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
100841930
NCBI-ProteinID:
XP_014754800
UniProt:
A0A0Q3INC5
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All DBs
Position
2:complement(34637338..34657061)
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AA seq
1029 aa
AA seq
DB search
MFFSGDPTSRKRVDLGGRSNKERDRQVLLEQTREERKRRLAVRLQNSSATKIQKCFRGKK
AFDMARSEVRKTFCSTFGENCQRVDWNCFSTNSDFLRQLLFFFNASEDNDIAILSQVCNL
LLQYVKHGDVVNLFAGNDYSAVEPLVSHRVKKLALICVHAVHQKRYDWSSQLLMSVESAA
MPFVRLLEAVACLINPKLPWNCKVVGYLQQRKIYCLFRGIISTVPQNASNLEHRTSALEQ
VLMLVASHVGDHPCSCPIVDPRWSFSSQLLSIPFLWHRLPHFKKVFSANGLSKYYIHQIA
CYLPSRADVLPNDVSANHPGYACVLANVLEAATWILSEPKFASDRAADIITVSTSLLDAL
PAITSPTERADDDDDMPMDVDVKSGLDVDLQRQITAAFDSNSRLLEHLVNALFRGTLSTN
YSDPSGPSDAEVEAVGSICAFLHVMFNTLPLDVTMTVLAYRTDIVPALWNFIKRCHENQR
WPYFSKYISPLPADAPGWLLPVSVFCPIYRYMLKIVDNEEFYEQQKPLSLKDLKSLILIL
KQALWQLLWIIPSHTSPTQKALPNLLGLKKMSIDNLKSRARIGLSELLTQLQDWNNRLPF
TSESDFYSQEATSENFVSQAILGNTRASEIIKLAPFLAPFTIRVRIFTSQLANSKQSATS
HSALTRHRFKIRRSRLLEDAFDQLSLLSEEDLKGPIRVAFVNEHGVEEAGIDGGGIFKDF
MENITRAAFDVQYGLFKETVDHLLYPNPGSGLVHEHHLQYFRFLGSLLGKAMYEGILVDL
PFATFFLSKLKQKSNFLNDLPSLDPELYRHLLFLKHYHGDLSDLELYFVIVNNEYGEQSE
EELLPGGREMRVTNSNVIMFIHLVANHRLNYQIRGQSTHFLRGFQQLIPKDWIDMFNEHE
IQLLISGSLESLDIDDLRLNTNYAGGYHPDHEIIDMFWEVLKSLSSDNQKKFLKFVTGCS
RGPLLGFEYLDPKFCIQRAGVPGVEEHGDRLPTSATCMNLLKLPPYRTKEQMQTKLLYAI
NSEAGFDLS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctccggtgacccgacgtcgcggaagcgggtggacctgggcggccggagcaac
aaggagcgggaccgccaggtgctgctcgagcagacgcgcgaggagcggaagcgccgcctc
gcagtgcgcctccagaactcctccgccacgaagatccagaaatgcttcagagggaagaag
gctttcgacatggcacgctcagaagttcgtaagacattttgttctacttttggggagaac
tgccagagggtagattggaactgcttcagcactaattctgattttcttcgtcaattgttg
ttcttcttcaatgcaagtgaagacaacgatattgctatactttctcaagtctgcaactta
cttctacagtatgttaaacatggagatgttgtaaatctctttgccggcaatgattactcc
gcagtggagcctcttgtgtctcatagggtaaaaaaacttgcactcatctgtgtgcatgct
gtccaccagaagaggtatgattggagtagtcaacttttgatgtcagtggaaagtgcagcg
atgccttttgttcgattattagaagctgtggcttgtttaataaaccccaaactaccgtgg
aactgcaaagtagttgggtatcttcagcagagaaagatctattgcttgtttcggggaatt
attagtacagtaccgcaaaatgcgagtaatttggagcaccgtacatctgcgctggagcaa
gttctcatgcttgttgcttcacatgttggcgaccatccatgttcttgtccaattgtggat
ccaagatggagtttttcctcgcagcttctatccattccttttctctggcatcgtttgcca
cacttcaagaaggttttctctgctaatggactcagcaaatattatatccaccagatagct
tgctatttgcccagtcgtgctgatgttcttccaaatgatgtatctgctaatcatccagga
tatgcgtgtgttcttgcaaatgtgcttgaagctgcaacgtggattttatctgaacctaag
ttcgcttctgatagagcggccgacattattactgtttctacgtcattgctggatgcgttg
ccagcgattacatcacctactgaaagggctgatgatgacgatgacatgcccatggatgtc
gatgttaaaagtggtcttgatgttgatttgcaaagacagataactgcagcatttgattca
aattcaaggttgcttgaacatttggtgaatgctctgttcagaggcacattaagcacgaac
tattctgatccatctggaccatcagatgctgaggtggaagctgtcgggtctatttgtgct
tttcttcacgtcatgttcaacacattgcctctagatgtaactatgactgtgctggcctac
cgtactgatattgttcctgcgctatggaattttataaagcgatgccatgaaaaccaaaga
tggccatatttttcgaagtatatctctcctttgcctgcagatgctcctggttggcttctg
cctgtgtctgtgttttgtcctatatacaggtacatgttaaagatcgttgataatgaggaa
ttctacgaacaacagaaacctctttcacttaaagatttgaagtccctaattctcattcta
aagcaggctttatggcagcttctttggattattccttcacatacctctcctactcagaaa
gcgttacccaatcttttaggtcttaagaaaatgtccattgataatcttaagagtcgggca
aggattgggttatctgaattactcacacagttgcaagactggaacaaccggctcccattc
acttccgaaagtgatttctattctcaagaagcaacaagtgaaaattttgtctcacaggcg
atacttggcaacactcgagcatcagaaattataaagcttgctccctttctggcgcctttt
accattagagtcagaatatttacttcgcaactggcaaattctaaacaatcggcgacatcc
cattctgccttgacaagacatcggttcaaaataagaagaagtcgacttctggaggatgct
tttgatcagctaagcttgctatctgaagaagatcttaaaggaccgatccgagtagcattt
gttaatgagcacggtgtggaagaagctggaattgatggaggtggaattttcaaagatttc
atggaaaatatcactcgtgctgcttttgatgtgcagtatggcctattcaaggaaacggtt
gatcatcttctgtaccccaaccctggatcaggattggttcatgaacatcatctgcagtat
ttccgttttcttgggagtctcctcgggaaggcaatgtatgagggcatactcgtcgattta
ccgtttgcaaccttcttcttgagcaagctgaaacagaagtccaattttttgaatgatctg
ccctcattggatcctgaattgtatcgacatcttctatttttaaagcattatcatggcgac
ctctcagatctggagttgtactttgtaatcgtgaataatgaatatggtgaacaatctgaa
gaagagctgcttcctggcgggagagagatgcgtgttactaatagtaatgttattatgttt
atccaccttgttgccaaccatcgattaaattatcagatccgtggacaaagtacacacttt
ttgagaggatttcaacaacttataccgaaggactggatcgatatgttcaatgaacatgaa
attcagcttctcatatctggctctctggaaagcttggacattgatgacttgcgcttgaac
accaactacgctggaggttatcatccggatcatgagattattgatatgttctgggaggtt
ttaaagagcttgagttcagataatcagaaaaagtttctcaaatttgtgactggatgctct
cgtggaccactccttggattcgaataccttgatccaaaattctgcattcagagagctggt
gtcccgggcgtagaggagcatggagaccgcttgcccacttctgctacgtgcatgaacctc
ctgaagctccctccatacagaacgaaggagcagatgcaaaccaaattgttgtacgcaata
aactcagaagctggtttcgatctgagctaa
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