Brachypodium distachyon (stiff brome): 100841955
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Entry
100841955 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100841955
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100841955
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100841955
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100841955
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100841955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
100841955
NCBI-ProteinID:
XP_003571975
UniProt:
I1HZ67
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All DBs
Position
3:complement(7385146..7392934)
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AA seq
971 aa
AA seq
DB search
MLQPREADVPALFVVFIVLPVIAYFLLGRWHDAVSKKARVGVLAQKAAEEDFKVETMACP
DVVLPGPSLRPMPYLRSVPSFRPEYHECATCHGPAKTRCSRCKSVRYCSGKCQIIHWRQG
HKQTCQLWHVNGGSNSGLLPNTEGSEQMPFLSNLNSPLPGGDNHLHDLNFDTVSEPSFAT
TDSYTLGTDAFPTEKSNQNPHSSENGASVASSEKCNHSVDDETRSSEIASANKVSNNSFG
CSDGKNGNPDSTYLHNGMVQHPNSCAPETRKRPKASITVYEPDMGVYLTSDMISSCEGPY
ASATESLQRSNSSGKATGKGNMVHKKPPYPSGKVASSQKSQEVSTSYQYDDHEKNPYSKS
DQRFTKPSVSTSNNLQGSNGTSKLGISKVDVLRKPSKFLKTSLVGLINDNKRSKVLFRYE
DLVKFFQYEVRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSKNGCLM
CELEQYASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACLDGL
GGEKHVEPSLQETTLIQQMFGGRLKSKVKCLRCLHESERYENIMDLTLEIHGWVESLQDA
LTQFTAPEDLDGENMYKCGRCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVT
FPEMLDMVPFVTGAGDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEV
KAVSPNQVMSEGAYMLFYLRSFPRPPRIYIEKGLLPVTSSAKRHSSKSSKGSKEEQKLAE
SLFASNDKICGVYDFRPDEEGYRQDQHAELRPRNFYHTDDAFAESVSTDFSDATSSEWSL
FTSSDESSFTTESTRDSFSVVDYSDNAGLDPITSIFGPYYAPDHPPGNFASCTRFSPSNP
ETRYFSESTGFVSDSSSLPTHPYGNVHRGRYPDRACASSAEPLASANQRSVYGRYGHSRD
GFVQTSGFCHM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaccaagggaagctgatgtgcctgcactctttgttgtatttatcgtacttccg
gtgatagcatattttcttcttgggagatggcatgatgctgtaagtaagaaggcaagggta
ggtgtgcttgcccagaaagctgcagaagaagactttaaagtggaaacaatggcgtgtcca
gatgttgtattgccaggaccttctttgagacccatgccgtatttgagatctgtaccttct
tttagacctgaataccatgagtgtgctacttgccatggtcctgcaaagacccggtgctcg
agatgcaagtctgttagatactgctctggtaagtgtcaaataatacactggaggcaaggg
cataagcaaacatgccagctatggcatgttaacggtggtagcaactctggcttactacct
aatacggagggttctgaacagatgccattcttgagtaacctgaattcacctcttccaggg
ggtgacaatcacctgcatgacctgaattttgatactgtatcagagccgtcctttgcgaca
actgatagctatactctaggtactgatgcatttcccacagaaaaatcaaaccaaaatccg
cattcaagtgaaaatggtgcttctgttgcctcttctgaaaagtgcaaccacagtgttgat
gacgaaacccgctcatctgaaattgcatcagcaaataaggtttcaaacaacagttttggt
tgttcagatgggaagaatgggaaccctgattcaacttatctccacaatggtatggtacaa
catcccaatagttgtgctcctgaaacaagaaaacgacctaaagcaagcatcacggtttat
gaacccgacatgggtgtctatttaacttctgatatgatcagttcttgtgaggggccatat
gcttctgcgacagagtcactacagaggagcaactcatctggaaaagctactggaaaagga
aacatggtgcacaagaagcctccttatccatcaggcaaggtggcttcatcacaaaaatca
caggaagtgtcaacgtcatatcaatatgatgaccatgaaaagaatccttacagcaaaagt
gatcaaagatttaccaaaccaagtgtctcgacaagcaacaatttacaaggaagcaatgga
acctcaaagttaggaatatccaaagttgatgttctgaggaagccctcaaaatttctaaaa
accagcctggtgggtttaatcaatgataataagaggagcaaggtattgtttaggtatgag
gatcttgttaagttctttcagtatgaagtacggggcatttctcccagaggacttttcaat
tgtgggaacagctgctatgctaatgctgttctacaatgtctgatgtgcacaaaacccctg
atgatctacctgcttttgagattgcattctaaagactgttcaaagaacgggtgtcttatg
tgtgaacttgagcaatatgcttcaacattacgtgaaagtggcggacccgtgtctccaagt
agaatcctttctaatctgaggaatattggatgtcgcttgggtggtggaagtcaggaagat
gctcatgaatttttaaggcatcttgtgatgtctatgcaagcagcatgtttggatggatta
ggtggtgagaagcacgtagaaccaagcttgcaggaaactacactgatacaacagatgttt
ggtggccgccttaaatctaaggttaagtgcctcagatgccttcacgagtctgaaagatat
gagaatataatggatcttacattggagattcatggttgggtggagtctttgcaagatgct
ttgacacaattcactgctcctgaagatttagacggggagaatatgtataaatgtggaagg
tgctgtgcttatgtcaaagcaagaaaacaactaagcgtgcatgaggtgccgaatatatta
acagtagttttgaaaagattccagacaggaaagtacggcaagattaacaaatgtgtcact
ttccctgaaatgttggacatggttccttttgtcactggggctggtgatcacccccctctt
tacttcttatacgctgtggtcgtacatgtggatacagaaaatgcatcattctctggtcat
tacatttcatatgtcaaagatatgcagggcacatggttgagaattgatgactcggaggtc
aaggctgtatcaccgaatcaagttatgtcagaaggtgcctatatgctattctacttgaga
tctttccctcgcccaccaaggatatacattgaaaaaggcctattgcctgttacatcatcc
gcaaagcgccactcatcaaaatcctccaagggctctaaagaagagcagaagctggcagaa
tcactatttgcttccaatgataaaatatgcggtgtctatgattttagaccagacgaggaa
ggctacaggcaagatcagcatgctgagttgaggccaagaaatttttatcataccgatgat
gcttttgcagaatcggttagcacagacttctcggatgctacatcaagcgaatggtcactg
tttacgagctctgatgaatcctcgtttaccactgaaagcactagagattcattcagtgtt
gtggattacagtgacaatgctggccttgatccaattacttctatattcgggccatattat
gctccggaccatcctcctggcaattttgcctcatgtacaaggttctcaccttccaatcca
gaaacaagatacttttctgagagcacaggctttgtctcagattcctcctccttgccaact
catccctacggcaatgtacatagaggaagatatccagacagggcttgcgcatcttcagct
gaacctcttgcttcagcaaaccagcgaagcgtgtatggtaggtatggccatagtagagat
ggttttgtgcaaacatctggattttgtcacatgtaa
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