Brachypodium distachyon (stiff brome): 100842025
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Entry
100842025 CDS
T01717
Name
(RefSeq) polygalacturonase ADPG2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00040
Pentose and glucuronate interconversions
bdi01100
Metabolic pathways
Module
bdi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100842025
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100842025
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Motif
Pfam:
Glyco_hydro_28
DUF3551
PDZ_1
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
100842025
NCBI-ProteinID:
XP_024313990
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Position
2:3176143..3178853
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AA seq
200 aa
AA seq
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MTLFRCSQVHVDSVSVTAPADSPNTDGINMGNSDHVYISSCSFQTGDDCVSILSGTTDVN
VTNTTCGPGHGIRYNCTTICVGLQGGMGKANGFLFENLKMTAVRIPIDIDQFYCPQGNCP
TKDGGVSITDARFVNIHGTSADKQAIQILCSQSVPCRGIYLDDVTLYWDKQNSQAQSKVL
NAEGTIVGDVVPEVQLGIQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgttccggtgcagccaggtgcatgttgacagcgtctccgttactgcgccagcc
gatagtccaaacactgacgggattaacatgggaaattctgaccatgtgtatatctcgtct
tgctctttccaaacaggagacgattgtgtatcaattttgtcgggcaccactgatgttaat
gtcaccaacaccacctgtgggcctggtcatggcatcaggtacaattgtacaaccatttgt
gtaggcctgcagggaggaatgggaaaagcaaacggattcctttttgagaacctcaagatg
actgcagtacgaattcctattgacatcgaccagttttattgtccgcagggaaactgtcca
acaaaggatgggggtgtgtccataaccgacgcacgttttgtcaacatccatgggacatcc
gctgataaacaggccatccaaattttgtgcagccaaagtgtgccgtgccgtggcatctat
ctcgacgatgttaccctctattgggataaacaaaattcccaagcacagtcaaaagttcta
aatgccgaaggaaccatcgtgggcgatgtggtacctgaagtgcagctcgggatacaacag
tag
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