Brachypodium distachyon (stiff brome): 100842049
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Entry
100842049 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100842049 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100842049
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
100842049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
Motif
Other DBs
NCBI-GeneID:
100842049
NCBI-ProteinID:
XP_014757186
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All DBs
Position
3:59147154..59151597
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AA seq
1106 aa
AA seq
DB search
MEPPPPSTLSAQDWEHVLDDFSSPPPRRDRWLHLPLLDLALSSLPRRDLPSHLKPLLLSL
IDDHLLPAPPSSLPLLLASLLAFPHDHPLRDHLLLTVVSAFASSLSAPLASSQAAPLAGL
VDALLAAANRPNHATDRAARALACDALRALDDALPGLLADVLGHAYALAAAERSPAAQSY
ILLLASAARSVIRVGRLGSNASLLAVSGPPTPFSVPAHLLVSSSLKPAASVRTPSELNVR
EIRKVLALIMERPQVLTPPAAMELAAIVAEVASAVLEWAPAIAAHVKVQFGGMAYSSSPM
LLHSVLTLFVQFPDAFGADDERRIARRLASAACEAHRPLPVRLLALHWLLGSGRFRGSVP
GLAQWFYPGLFDPLALKAKKLDCLAFVAAGIDGDKVGGRYGQQTSKLIDDGLVCVSAFRW
LPAWSTETGVAFRALHRVLVGASPHSTNDMGCSGAGELLNSTTFHHFQAMLVDMTSEHRG
LVPVIADFINRLLACTTHQWVGEQLLRTVDECLLPRLEPGYLLASYYPLFEKIAQNETVP
QLRLIELLTKQMVSLAKKHETDTSLKSWSQGSKVVGICRIMLKYHHSSHIFLPLSHLLVV
TVESFPDLEIRDHARICLRMLSCIPGKKLRNLMGIGEQPTPSNPGSMFDVPSPHPAQDPE
SMPSLASYIHLERVVPLVVKQSWALTLPNFSVQSRASGHILSIQDVSVAPPEQEKPPEPT
IERIGYTQEALRVMDSKGAETLEILRRHFSCIPDYQHLSGLKIKIYCTFRFDSEPFSCAW
GSDSTVSCSEGADELPALFAVTITFSSSAHFGEIPPCRVPFLLGEPPGSGVDIVPIDNCH
QEESSYRASVVIELEPREPSPGLIDVGIAANTENCQVISGSLQPITVGIEDMFLKASIPP
DTPEEGVAAYYQDLFNALWEACHSSSNTGRETFPLSGGKGLAAISGTRSVKLLEVTPKVL
IGAVERYLAPFVVAVAGLSLITILRGNGIIKNVVWEESDSDATVGADALVPYSTDNNLQL
QRIDDDEIDIGVQRYGHLSKRDMGVVRVLIFLPPSLMPTVRIRSWLQPENKMTALVPDSL
AVSRDISVQISSVALVVWIKPATISS
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggagccaccaccgccgtcgaccctctcggcgcaggactgggagcacgtcctagacgac
ttctcctccccgccgccgcgccgcgaccgatggctccacctcccgctcctcgacctcgcg
ctgtcctctctgccccgccgcgacctcccctcccacctcaagcccctcctcctctccctc
atcgacgaccacctcctcccggccccgccctcctcgctcccgctcctcctcgcctccctc
ctcgccttcccccacgaccacccgctccgcgaccacctcctcctcaccgtcgtctccgcc
ttcgcctcctccctctccgcccccctcgcctcctcccaggcggccccgctggccggcctc
gtcgacgcgctcctcgccgccgccaaccgccccaaccacgccaccgaccgcgccgcgcgc
gccctcgcctgcgacgcgctgcgggcgctcgacgacgcgctgccgggcctcctcgccgac
gtgctcggccacgcctacgcgctcgccgccgccgagcgctcccctgccgcgcagtcctac
atcctcctcctcgcctccgccgcccgcagcgtcatccgcgtcgggaggctcggatccaac
gcctcgctcctcgccgtctccggcccgcccacccccttctccgtgccggcccacctcctc
gtctcctcctcgctgaagcccgccgcttccgtgaggaccccgtcggagctcaacgtgagg
gagataaggaaggtgctggctctgatcatggagaggccgcaggtgctgacgcccccggcg
gccatggagcttgctgccatcgtcgcggaggtggcctcggctgtgctggagtgggcgccg
gccatcgccgcgcacgtcaaggtgcagtttggcgggatggcgtattcgtccagcccgatg
ctgctgcactcggtgctcacactgttcgtccagttcccagatgcgtttggggccgacgac
gagcgcagaattgcgcgccgcctggcgtctgctgcctgcgaggcgcaccggccactccca
gtgcgattgctggcgctgcattggctgcttgggtcggggaggttcagaggttcggtgcct
ggactcgcccaatggttctaccctggcttgttcgaccccctggcactcaaggccaagaag
ctggattgcctagcctttgttgctgctggcattgatggtgataaggttggaggcaggtat
ggccagcagacgagtaagctcatcgatgatggcctagtctgtgtttcggccttcaggtgg
ctcccggcatggagtactgagacgggcgttgcattccgagcgttgcacagggtcttggtt
ggtgcttcccctcacagcaccaatgacatgggttgctccggagctggtgagctcctgaat
tctaccaccttccaccatttccaggctatgttggttgatatgacatcagaacatcggggt
ttagtccctgtgattgctgatttcatcaaccgtctgctagcatgcaccactcatcagtgg
gtgggggaacagttgctccgaactgttgacgagtgtctgctcccgaggcttgaaccaggc
tacctgctcgcatcgtattaccctctttttgagaagattgcgcagaatgagacagtccct
cagctccgtctaattgaattgctcaccaagcagatggtttctcttgccaagaagcatgag
acagacacttcattgaagtcgtggtctcagggcagcaaggttgtgggtatttgtcgtatc
atgctgaagtaccatcacagctctcatatcttccttcccctctcacacctacttgtggtc
accgtcgagtcgttcccggacctagagatccgggaccatgccaggatatgtttgcggatg
ttgtcttgcattcctggcaagaaacttaggaatctcatgggaattggagagcaacccaca
ccctctaatccaggttccatgtttgatgtcccgtcaccacatcctgctcaagatcctgag
agcatgcctagtttggcatcgtacattcatcttgaaagagttgtgcctctggttgtgaag
cagtcatgggccctcacgttacccaatttcagcgtccagagcagagcatctggtcacatt
ctaagtatacaggacgtgagcgtagctcctccggagcaagaaaagccaccagaacctacc
attgagaggattggatatacacaagaagcgttgcgtgtgatggattcaaagggtgctgaa
acactggaaatccttagaaggcacttctcatgcattcctgactaccagcacttgtctggt
cttaaaataaaaatatactgcacttttagatttgattcagaaccatttagctgtgcttgg
ggatctgattcaactgtgtcatgttctgaaggggcagatgagttgcctgccctttttgca
gtgacaattaccttctcatcaagtgcgcattttggagaaattcccccatgtcgtgtgcct
ttccttctgggtgaacctccaggttctggtgtggacattgtccccatagataactgccac
caggaagaatcaagttaccgtgcatcagtagtgatagaactggagcctcgagagccatca
cctggtcttattgatgtaggcattgctgcaaacacagagaattgccaagtcatatctggt
tctcttcagcccattacagttggcatagaggacatgtttttgaaggccagcatacctccc
gatactccggaagagggtgtagctgcgtattaccaggatctgtttaatgctctatgggag
gcctgtcacagttcttctaacactggtcgagagactttccctttgagcggagggaaaggg
ttagctgcaattagtggaacccgttccgttaagctccttgaggtgactccaaaggttttg
attggagctgtagagagatacctggctccctttgttgtcgctgtcgctgggctttcgctt
atcaccattctaagaggtaatggaatcattaagaatgttgtgtgggaagaaagtgactcc
gatgctactgttggtgctgatgcattggttccgtactcaacggacaacaatctgcagctt
cagcgcattgatgatgacgaaatcgatatcggtgtgcagaggtatgggcatctaagcaag
agggatatgggtgtcgtgcgtgtcctgatattcttaccgcccagtttgatgccaacagtt
agaattcggtcctggcttcaaccagagaacaagatgacggcactggttcctgattcgctg
gcagtttctagagatatttcggttcaaatttcatctgttgcattagttgtctggatcaag
ccggcgaccatttcttcctga
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