KEGG   Brachypodium distachyon (stiff brome): 100842169
Entry
100842169         CDS       T01717                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03082  ATP-dependent chromatin remodeling
bdi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100842169
   03083 Polycomb repressive complex
    100842169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bdi03036]
    100842169
Chromosome and associated proteins [BR:bdi03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     100842169
  Histone modification proteins
   HAT complexes
    HATB complex
     100842169
   HDAC complexes
    Sin3A-HDAC complex
     100842169
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     100842169
    PRC2.2
     100842169
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     100842169
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100842169
  Chromatin remodeling factors
   NuRD complex
    100842169
   NuRF complex
    100842169
   NuRF complex (fruit fly)
    100842169
SSDB
Motif
Pfam: WD40 WD40_Prp19 CAF1C_H4-bd WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD_LRWD1 WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_WDR19_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 100842169
NCBI-ProteinID: XP_003576779
UniProt: I1ISB4
LinkDB
Position
4:41682554..41687532
AA seq 406 aa
MDGGFSLPAAAAAAAMEMEEHLNWKKNAPVLYDLVISHALDWPSLTVQWLPTQSPASAHS
HRLVLGTHASDDFPNHLMIVDAVLPLPPRLAAAAAAEGRVVPDPSLSIGRSMPHRGEVNR
ARFMPQRPLTVATKTCVDEVHVYHLGDDGEKRGADVVLRGHDAEGYGLAWSPMKEGWLLS
GSYDKKICLWDLAAGNGSQVMDAQQVFEAHEDIVEDVAWHLKDGNIFGSVGDDCKLMMWD
LRTNKPEQSVVAHQKEVNSLSFNPFNEWILATASGDATIKLFDLRKLSRSLHAFDNHEGE
VFQVEWNPNLETVLASHAADKRVMIWDVSRIGDEQAEEDANDGPPELLFVHGGHTAKISE
LSWNPTQKWAIASVAENNVLQIWEMAESIYSDDSYLHDNNDSCLST
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggacggcggcttctccctgccggcggctgcggcggccgccgcgatggagatggaggag
cacctgaactggaagaagaacgcgccggtgctctacgacctcgtcatctcccacgcgctc
gactggccttcgctcaccgtccagtggctgcctacgcagtccccggcctccgctcactcc
caccggctcgtcctcggcacccacgcctccgacgacttccccaatcacctcatgattgtg
gacgccgtgctgccgctcccgccccgcctggccgcggcggccgccgctgagggcagggtc
gtcccggacccgtccttgtccatcggccggtcgatgccgcaccggggcgaggtcaatcgt
gcccggttcatgccgcagcggccgcttaccgtggccaccaagacttgcgtcgatgaagtg
cacgtgtaccacctcggcgacgatggcgagaagcgcggcgcagatgtcgtgctcaggggt
cacgacgcggaggggtatggtctggcgtggagcccgatgaaggagggatggttgctgagc
ggctcgtatgataagaagatttgcctatgggatctcgctgctgggaatgggtcccaggtt
atggatgcgcaacaggtgtttgaggctcacgaggatatcgttgaagatgttgcttggcac
ctgaaagatggaaacatatttggatctgttggtgatgactgcaagttgatgatgtgggac
ctgcgaacgaacaaaccagaacaatctgtagttgcgcaccaaaaggaagtcaactccttg
tcattcaatccatttaatgaatggatcttggctacagcatctggggatgcaactatcaag
ctatttgacttgcggaaactgtcaagaagcttgcatgctttcgacaatcatgagggtgaa
gtttttcaggttgagtggaatccaaatttggagactgtattagcttcacatgctgcagac
aaaagggtgatgatatgggatgttagtaggattggagacgagcaggcggaggaagatgca
aatgacgggccaccggagctgcttttcgtccacggtggccacacagctaagatatcagag
ctgtcgtggaatcctacccagaaatgggccatcgccagcgtggccgagaataacgtcctg
cagatctgggagatggcggagagcatatactccgatgacagttatctgcacgataacaat
gactcgtgcctctccacatga

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