Brachypodium distachyon (stiff brome): 100842178
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Entry
100842178 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 26 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100842178
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100842178
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100842178
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100842178
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100842178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
100842178
NCBI-ProteinID:
XP_003559032
UniProt:
I1GN00
LinkDB
All DBs
Position
1:complement(5440262..5452566)
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AA seq
1074 aa
AA seq
DB search
MSRHNTRNKNKRPRADESASPSYAVLKKIHSTGTITEGDIRQLYSVWKPVCQGCHGNTKD
SPNCFCGLVPNANGARKTGLWQKNSEHVRSLGPNPSADLRDSMETPAGLTNLGATCYANS
ILQCLYMNTYFRSGIFSLEPDILKKHPVIDQLARLFVQLHSSKMAFIDSAPFIKTLELDN
GVQQDSHEFLTLFLSLLERSLSHSKVSGAKTIVQHLFRGSVSHVTRCSSCGRDSEASSKM
EDFYELELNIKGLNNLEESLDDYLSVEALNGENQYSCESCQKRVDATRCIKLRSLPPVVN
FQLKRYVFLPKTTTKKKISSAFSFPAQLDMGKRLSNPSSSYTYDLAAILIHKGSAANSGH
YVAHIKDESSCQWWEFDDECVSKLGFHPFGEKPSKSSDKVDQKSEVTSSEGSVANGNKSS
YHEAKPSCTMGPMFSSTDAYMLMYKRSSKDENGTESNNIMEANNSSLPRHFADEINELNA
LYVKECEEYESKKDKLLASIQERRDEVRAVLTEAPAPPDDDSYFWISADWLRQWADNANP
PSSIDNSPIQCEHGKVPASKVTSMKRLSAKAWQKLLSKYGGGPVLSRNDVCMECLKDGAK
TAVSADVYRDRKASLKNLAEAALAGIIPEGPSYFVSKTWLTHWLRRKNADIPSDPDNVPT
SALRCSHGDLLPEHAPGAKRVSVPESLWLFLYETVNAREADNIATFPSDCQPCEICGEKL
SVVASVEDNLRAIKLKQRQRHEKLISGKGFALHPGQKYYLVPSSWLSEWRTYITATGKNV
SSLPEPQSLEVVINSLKCEKHSRLLQRPLDLVCKRGNITQKTSNTDGLAIISESDWILFS
EEWNITHGNGASAEIICSNSSQDKLHGSSEAMIILDEDPDQSINDANNSLEDSSPYIRTD
PEVCEECIGEIESCALVQKLNYQNEDIHVYLVRGKEAPKSIREACPALPIPDRRTTKRSR
RTTSGNSINLKVSGSTSVYQLKLMIWESLGIVKENQKLHKGSVEIEDDLATLADKAIFPG
DVLWVKDSEMFENRDIADEISEQKADVSAEEGFRGTLLTSSVSTQLCQDIALSE
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcacaacacacgcaataagaacaagaggccgcgggccgatgagtccgcgagc
ccgtcctatgctgttctgaagaagatacattccacgggcacgatcacggaaggcgatatc
cggcagctttatagcgtgtggaagccggtttgccagggctgccatgggaataccaaggac
tcgcccaattgtttctgtggtttggtccccaatgccaatggagcgaggaagactggcctg
tggcagaaaaatagcgagcatgtccgtagcctcggtcctaacccgtctgccgacctccgt
gattccatggagacgcctgctggattgactaatctaggcgcgacatgttatgcaaacagc
atactgcagtgcctctatatgaatacttacttccgttcgggcattttctctctggagcca
gacatcttgaagaagcaccctgttattgatcagctggctcggttatttgtgcagctacac
tccagcaaaatggctttcattgattcagcaccttttatcaagacattggaactagacaac
ggcgtccagcaggacagtcatgaatttctcaccttgtttttgtctctgctcgagcgttca
ttaagccactccaaagtctccggtgctaaaactattgtgcaacatttgttccgcgggagt
gtgtcacatgtgactcggtgctcatcatgtggaagggattctgaagcatcttcaaagatg
gaagacttctatgaactggagctaaacattaaaggtctaaataatttagaagaaagtttg
gatgactacttgagtgtggaggcactgaacggggagaaccagtactcctgtgagtcatgt
cagaaaagggtagatgcgactcgttgtataaaacttcgttcgcttcctcctgttgttaat
tttcagctcaagcgttatgtattcctaccaaagacaacaacaaagaaaaagatctcttca
gcattcagttttccggcacaactagatatgggaaagcggttatcaaacccttcatctagt
tacacttatgatctggctgctattttgattcacaagggtagtgctgctaatagtgggcac
tatgtggcacatataaaggacgaaagcagctgtcagtggtgggagtttgatgatgagtgt
gtatccaaacttggttttcacccctttggtgaaaaaccaagcaagtcatctgataaagtt
gatcagaaatctgaagttacttcttcggaaggttctgttgcaaatggtaataaaagtagc
tatcatgaggctaaaccgagttgtactatgggaccgatgttctcttctacagatgcttac
atgctgatgtacaaacgatccagcaaggatgagaacggtaccgagagcaataatatcatg
gaagccaataatagttcgcttccacgccattttgcggatgagattaatgaattgaatgca
ttatatgtaaaggaatgtgaggagtatgaaagtaagaaagataaacttttggcgtccata
caagagaggcgtgatgaagtaagagctgttcttacagaagcacctgctcccccagacgat
gattcatatttttggatttcagcagactggcttcgccaatgggcggataatgccaaccct
ccatcttcgattgacaatagtccaatacaatgtgaacatggaaaggttccagcatctaaa
gtcacatctatgaagcgattatcggctaaagcctggcagaagttactttccaaatatgga
ggaggaccagtattgagccgtaatgatgtctgcatggaatgcctcaaggatggagcaaaa
actgcagtgtctgctgatgtctatcgtgatcgaaaagcatcattgaaaaatctcgcagaa
gcagcacttgctggaattatcccagaaggaccttcttactttgtttcaaagacatggttg
acccattggttgcgaagaaaaaatgcggatatcccttctgatcctgataatgtaccaaca
agtgctctaagatgcagccatggggatcttcttccagagcacgctcctggggcaaagcgt
gtatctgtgccagagagtctatggctgtttctctatgaaaccgtcaatgcaagggaagct
gacaatattgcaacttttccatcagattgtcaaccatgcgaaatctgtggcgagaaattg
tcagttgttgcttctgttgaggataatcttagagcgataaaactcaagcaacgacagaga
catgaaaagttaatatctgggaaaggctttgcacttcaccctgggcaaaagtattatttg
gttccttcctcatggttgtcagaatggagaacttacattacggcgactggaaaaaatgtt
tcgtcgttaccagaacctcaaagtcttgaagttgttatcaattcacttaaatgtgagaag
cattcaagattgttgcaaaggcctctggatctagtttgtaaacgtgggaatatcacccag
aaaacatcaaatactgatgggttagcgatcatctcagaatcagattggatattattctct
gaagagtggaatataacacatgggaatggcgcatctgctgaaattatttgtagcaatagc
tctcaagataaattgcatgggtcatctgaagcgatgataattttggatgaagatccagac
cagtctattaatgatgcaaataattctttggaggacagttcaccctatatcagaaccgat
cctgaggtttgtgaagaatgtattggagaaatagagagctgtgcattggtgcagaaactc
aactaccagaacgaagatatccatgtctatcttgtgcgtggaaaagaggcaccaaagtca
attagagaggcatgtccagctcttcctattccagatcgtcggactacgaagcgttcccgg
agaacaacctcggggaactcgatcaatttaaaagtctctggttccacatctgtctatcag
ttgaaactcatgatatgggaatctctagggattgttaaggagaaccagaagcttcataaa
ggctctgttgagattgaagatgatcttgctactctcgctgacaaggctattttccctggg
gatgttctatgggtcaaagactctgaaatgtttgagaaccgtgatatagcagatgaaatc
tcagagcagaaggctgatgtatctgctgaggaaggcttccgtggtacactgctgacatcc
agtgtatcaactcagctttgtcaagacatagcattgagtgaatga
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