Brachypodium distachyon (stiff brome): 100842312
Help
Entry
100842312 CDS
T01717
Name
(RefSeq) ubiquitin-activating enzyme E1 3 isoform X2
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100842312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100842312
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100842312
Enzymes [BR:
bdi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
100842312
Ubiquitin system [BR:
bdi04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
100842312
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100842312
Exosomal proteins of other body fluids (saliva and urine)
100842312
Exosomal proteins of colorectal cancer cells
100842312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_UFD
E1_4HB
Motif
Other DBs
NCBI-GeneID:
100842312
NCBI-ProteinID:
XP_003562406
LinkDB
All DBs
Position
1:complement(13474653..13480314)
Genome browser
AA seq
1064 aa
AA seq
DB search
MRCLRRLLRRGLFSMLPTKRPPSPSGAGAEDGGDAKRPRLGESGTTDDRALPPPQEIDED
LHSRQLAVYGRETMRRLFASHVLVSGLNGLGAEIAKNLALAGVKSITIHDVKNVEMWDLS
ANFFLSEDDVGKNRAVACVAKLQELNNAVLISTLTEELTTEHLSKFQAVVFTDISLDKAY
EFDDYCHSHQPPISFIRTQVCGLFGSVFCDFGPNFTVLDVDGEDPHTGIIASISSDNPAI
VSCVDDERLEFQDGDLVVFSEVHGMAELNDGKPRKVKNARPFSFSIEEDTSKFGNYIKGG
IVTQVKEPKVLCFKTLRDAIRDPGDFLLSDFSKFERSPVLHLAFQALDKFMKDCGRYPVA
GCEEDAQSFLKISADINEASVDRKLESIDEKLLRQFASGSRAVLNPMSAMFGGIVGQEVV
KACSGKFHPLYQFFYFDSVESLPTHPLDPQDLKPSNSRYDAQVSVFGSKIQKKLEEANAF
VVGSGALGCEFLKNLALMGVACSGKGKLTITDDDIIEKSNLSRQFLFRDWNIGQAKSTVA
ATAASVINPSLLVDALQNRACPETENVFDDTFWEGLDVVINALDNVNARMYMDQRCLYFS
KPLLESGTLGAKCNTQMVIPRLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEF
EGLLEKTPNEVNSYLSNPAQYAAAMRKAGDAQARELLERVSECLDKDRCSTFDDCITWAR
MKFEDYFSNRVKQLTFTFPEDAATSTGTPFWSAPKRFPRALQFSAADTSHLNFIMSASIL
RAESFGIAIPDRAKNTSKLADVVKKVKVHMFEPKKGVNIVTDEKATNLSSTSVDDVSVID
DLLAKLEEYAKRLPSGFQMKPIQFEKDDDTNFHMDLISGFANMRARNYSIPEVDKLKAKF
IAGRIIPAIATSTAMATGLVCLELYKVIDGKHPIEDYRNTFANLALPLFSMAEPVPAKET
EHQNLSWTVWDRWCIKRNLTIAELLQWLAEKGLTAYSISCGTSILYNSMFPRHKDRLNKK
VVDVAKEVAKVEIPEYRSHLDICVACEDENENDVDIPVVSVYFR
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttacgtcggctgctgcgcaggggcttgttctccatgcttcccaccaagagg
ccgccgtcgccgtccggggcgggagccgaggacggcggcgacgccaagaggcccaggctg
ggggagtctgggaccaccgatgacagggccttgccgccgccgcaggagatcgacgaggac
ctgcacagcaggcagctcgccgtctacgggagggagaccatgcgccggctcttcgcctcc
cacgtcctcgtctccggcctcaatgggctcggcgctgaaatcgcgaagaatcttgccctt
gctggagtcaagtctatcactatacatgatgtgaaaaatgtggagatgtgggacttgtct
gccaatttcttcttatccgaggacgatgttgggaagaacagggctgttgcttgtgtcgca
aagctgcaagagctcaacaatgctgttctcatctcaactctaacagaggaactaacgacg
gagcacttgtccaagttccaggctgttgtttttactgatataagtttagacaaggcatat
gaatttgatgactattgccatagccaccagcctcccatctcctttatcagaactcaagtc
tgtggtcttttcggtagtgtcttttgtgactttggaccaaactttactgttcttgatgtt
gatggtgaagatccacatactggtataattgcatccatcagcagtgataaccctgcaata
gtatcctgtgttgatgatgagcggctcgagttccaagatggtgatcttgttgttttctca
gaggtacatggtatggcagaactgaatgatgggaaaccaaggaaggttaaaaatgccagg
ccattttcatttagcatcgaggaggacacaagtaaatttggaaattatataaaaggtgga
attgttacacaggtgaaagaacctaaggtattatgcttcaagacgctaagagatgccatt
agagaccctggagattttcttctgagtgatttttcaaagtttgaacgttcccctgtgctc
catctggcatttcaagctctggataaatttatgaaagactgtggacgctaccctgttgct
ggttgtgaggaggatgctcaaagtttccttaagatttctgctgatattaatgaagcctct
gttgaccgcaagctggaaagtattgatgagaaattactccggcagtttgcaagtggttct
cgagctgttttgaaccctatgtctgcgatgtttggtggtattgttggtcaagaagttgtg
aaggcatgttctgggaagttccaccctctctaccagttcttttactttgattctgtcgaa
tccctgccaacacatccattggacccccaagacttgaagccatcaaacagccgctatgat
gctcaggtttccgtatttggttccaagatccagaagaaacttgaagaggctaatgctttt
gttgtgggctctggcgctcttggatgtgaattcctgaaaaaccttgctttaatgggagtg
gcatgtagtggtaaagggaagctaactataacagatgatgatatcattgaaaaaagcaac
ttgagccgtcaattcttatttcgtgactggaatattggacaggcaaagtccactgtggct
gctacagccgctagtgttatcaaccccagccttcttgttgatgctcttcagaatcgtgcc
tgtccagaaactgagaacgtgttcgatgacacgttctgggagggcctggatgttgttatc
aatgcacttgataatgtcaatgccaggatgtatatggaccagaggtgcctgtacttctcg
aagccactactggagtcaggtacgttgggtgcaaagtgcaatacgcaaatggtaattcct
cgccttactgaaaattatggagcttcaagagatcctcctgagaagcaagcacctatgtgc
acagtccattcttttccacacaacattgatcattgcttgacatgggctcgttcggagttc
gagggcttgctcgaaaaaacgccaaatgaagtaaactcttatctgtccaaccctgctcag
tatgctgctgccatgaggaaggctggtgatgctcaagcaagagaattgcttgaacgtgtc
tctgaatgtcttgacaaggatcggtgtagtacatttgatgattgcataacgtgggcccgg
atgaaatttgaggattatttctcaaaccgtgtgaagcagctgacattcacttttcctgaa
gatgctgccactagtacgggcacgcctttctggtctgcccccaagcgcttccctcgtgca
ctgcaattttcagctgctgatacatctcacctgaatttcattatgtctgcttcaatattg
agagcggagtcatttgggattgctatacctgaccgggcaaagaacaccagtaagctggct
gatgtagtaaagaaggtcaaagtacatatgtttgagccaaagaaaggggtaaatattgtg
acagatgagaaggccacaaatctttccagcacctcggttgatgatgtctccgttattgat
gatctgcttgctaagttggaagaatatgccaagcggctaccttctggattccaaatgaaa
cctatccaattcgagaaggatgatgacactaactttcacatggatttaatatccggattt
gcaaatatgcgtgcaaggaactacagcattccagaggttgacaagctgaaggctaaattc
attgcagggagaattatccctgctattgcaacctcaaccgccatggccacaggacttgtg
tgccttgagctgtacaaggttattgatggcaagcaccccattgaagactaccgcaatacg
tttgcgaacctagcgctgccattgttctcaatggctgaaccagttccagccaaggagacg
gagcatcaaaacttgagctggactgtatgggaccgatggtgcataaagcgcaatcttact
attgcagaactcttgcaatggctggctgaaaagggccttactgcttacagcatttcctgc
ggcacctcgattttatataacagcatgtttccaaggcacaaggatagattgaacaagaag
gttgtggatgtcgccaaagaagttgctaaggtggaaattcctgaatacaggagccatcta
gatatttgtgtggcctgcgaggatgaaaatgaaaatgacgttgatattcctgtcgtgtcg
gtttactttcgatag
DBGET
integrated database retrieval system
