Brachypodium distachyon (stiff brome): 100842360
Help
Entry
100842360 CDS
T01717
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100842360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100842360
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100842360
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100842360
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100842360
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100842360
Messenger RNA biogenesis [BR:
bdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100842360
Chaperones and folding catalysts [BR:
bdi03110
]
Heat shock proteins
HSP60 / Chaperonin
100842360
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100842360
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100842360
Exosomal proteins of other body fluids (saliva and urine)
100842360
Exosomal proteins of breast cancer cells
100842360
Exosomal proteins of colorectal cancer cells
100842360
Exosomal proteins of bladder cancer cells
100842360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
Motif
Other DBs
NCBI-GeneID:
100842360
NCBI-ProteinID:
XP_003574065
UniProt:
I1HW10
LinkDB
All DBs
Position
3:249314..253797
Genome browser
AA seq
598 aa
AA seq
DB search
MASPFGGTSTCGLKAAAPAGFATKKQLSLVLPPCVSLPQKFRPRRKCSFRVNAAKELYFN
KDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVE
NIGAKLVRQAAAKTNDLAGDGTTTSVILAQGMITEGVKIVAAGANPVQIARGIEKTAKAL
VSELRKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRQGVVTLEEGKSAENNLY
VVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKINNARDLITILEDAIKSGYPIL
IIAEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIREEIGLS
LDKADSEVLGTAAKVLVTKDTTTIVGDGSTQEEVSKRVTQIKNQIEAAEQEYEKEKLNER
IAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDA
IKETLENDEQKIGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRYGYNAATGKY
EDLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKEAEQAPAANPMAGSGYGF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccattcgggggcacttccacatgtggcctcaaggccgccgctcctgctggc
ttcgcgaccaagaagcaactttcccttgttttgcccccgtgcgtttcgcttccccagaaa
ttcaggcccaggaggaagtgcagtttcagagtaaatgccgcaaaggagctctacttcaac
aaggatggatcagccatcaagaagctgcaaaatggagtcaataagcttgctgatctggta
ggagtcactcttggcccaaaaggacgcaatgttgtccttgagagcaagtatgggtcgccc
aaaattgtcaatgacggtgtcacggtggcaaaagaggttgagctggaggaccctgttgaa
aatattggagctaagttggttcggcaagctgctgctaagacaaatgatttggctggtgac
ggcacaaccacttctgttatccttgctcaaggaatgataactgagggtgttaagattgta
gctgctggtgctaatccggtgcagattgcccgtggtatcgagaaaacagccaaagcacta
gtcagcgaacttcggaagatgtccaaggaggttgaagatagcgaacttgctgatgttgct
gcagtaagtgctggaaataactatgaagttggcaacatgatagctgaggctatgagcaag
gttgggcggcagggtgtggtcacactcgaagaaggaaagagtgctgaaaacaacctctat
gttgttgaagggatgcagttcgatcgaggctatatttctccctacttcgtaactgacagt
gagaaaatgacagtggagtatgagaactgcaagctgcttcttgtggacaagaaaattaac
aatgccagagatcttatcactattctggaagacgcaatcaagagcggatatccaattctc
ataatcgcagaggatattgagcaggaagctcttgctacccttgtggtcaatcggcttaga
ggtgcattgaagattgctgccataaaagcccctggttttggagagcgcaagagtcaatac
ctggatgatattgctactctgacaggaggcactgtcatcagagaagaaattggactgtcc
ctggataaagcagacagcgaagtcctaggtactgctgccaaggttctagtgactaaggac
acaacgacaatagttggagatggtagtacgcaagaggaagtaagcaaaagggtgacacaa
atcaagaaccagattgaggctgctgaacaggaatatgagaaggaaaagctaaacgagagg
atagccaaactatctggtggagttgctgtcattcaggtgggagcacagactgaaactgag
cttaaggagaagaaactgagggttgaagacgcactgaatgcaacaaaggcggctgttgag
gaaggtattgttgtcggtggtggctgcacccttttaaggcttgcagcaaaagtcgatgcc
attaaagaaacccttgagaatgatgaacagaagattggtgctgaaatcgtaaggaagtcc
ttgagttacccccttaaattgattgcgaaaaatgctggtgttaacggcagcgttgttact
gaaaaggtccttgccaatgacaacttcaggtatggatacaatgccgctacaggaaagtac
gaggatttgatggctgctggtattattgaccccaccaaggtggtgaggtgttgcctggag
cacgccgcatcggtggcgaaaactttcatcacctcggacgccgtcgtcgtcgacatcaag
gaggcagagcaggcgcctgctgcaaacccgatggcaggttcaggttatgggttctaa
DBGET
integrated database retrieval system
