Brachypodium distachyon (stiff brome): 100842673
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Entry
100842673 CDS
T01717
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100842673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100842673
Spliceosome [BR:
bdi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100842673
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
100842673
NCBI-ProteinID:
XP_003557256
UniProt:
I1H1Y0
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Position
1:complement(50496202..50500658)
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AA seq
546 aa
AA seq
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MGADEQPSPTRKREREEEEGDAADVDGAAAEKRPRAEESLLGLASYEEEEEEEGGHANGR
PREKEAEDDDDEEEEEEDERRAPERRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLS
NLNVYACLVCGKYYQGRGLKSHAYTHSLEAGHHVFINLQTERVYCLPDGYEINDPSLEDI
RHVLNPRFAREQVLNLDKNKQWSRALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPL
RNFFLIPENYQHSKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASEKKFQIGVQ
SDPVEFMSWLLNTLHAKLRSSKRKNRSIIYDCFQGELEVVKEIHRKHIVGDEQNGESSSQ
VETTSDGMVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGEAVTEVV
RPSIARMRYRVIRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPKEK
EKLRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEAWYEMQDLHVTETLPQMVALSEAYMQ
IYEQHE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggacgagcagccatccccgacgcggaagcgcgagcgcgaggaggaggagggg
gatgcggccgacgtggacggtgccgcggccgagaagcgcccgcgtgccgaggagtcgctg
ctggggctcgccagctacgaggaggaggaggaggaagaggggggccacgcgaatgggcgg
ccccgtgagaaggaggcggaggatgacgacgacgaggaggaggaggaagaggacgagagg
agggctcccgagagaaggccgaggcaggtcgagctgcgccgggactgcccttacctggac
accgtgaatcgacaggtccttgattttgactttgagaagttctgctcaatctccttatca
aatttgaatgtgtatgcatgcctagtctgtggaaagtattaccaaggaagaggcttgaaa
tcacatgcgtatacccacagccttgaggcaggtcaccatgtgttcattaaccttcaaact
gagagagtttactgtcttcctgatggatatgagataaatgatccatcgcttgaagatatt
cgacatgttcttaatccaaggttcgcgagagagcaggttctaaatcttgacaagaacaag
cagtggtcaagagctctggatggctccaattatctacctggaatggttggtctgaacaac
attaaggagactgactttgtgaatgtcacaatacagtcattaatgagaattactcctttg
agaaatttctttctcataccagaaaattaccagcacagcaaatccccactggttcatcga
tttggagaactaactcgcaagatttggcatgctaggaacttcaagggccaagttagtcca
catgagttccttcaagcagttatgaaggccagtgagaagaagtttcagattggtgtacaa
tctgatccagtggaatttatgtcatggctcttaaacacactgcatgcaaaactaagaagt
tcaaagaggaaaaacagaagcatcatatatgattgctttcagggtgaacttgaagttgtt
aaagaaattcacaggaagcatatagtgggtgatgagcagaatggcgagtcaagttcacag
gttgaaacaacaagtgacggtatggtcactgaaacgtccagggttccattcttgatgctc
ggtcttgacctaccaccgccacctcttttcaaagatgccatggagaaaaatattattcca
caggtgccactgtttaatatactgaagaagttcgatggtgaggcagttacagaggttgtg
cgaccatccattgctcggatgaggtatcgagtcattcgacttccaaagtatatgatcctt
cacatgcggcggtttaccaaaaacaacttctttgtagagaaaaaccctactctagtaaat
tttcctgtgaagaacttggaattgaaggattacattccattacctaagccaaaggaaaag
gagaagctacgttcaaagtatgatctcatagccaacattgtacacgatggcaaaccgggt
gaaggatgttacagagtatttgtgcagcggaaatcagaagaggcgtggtacgagatgcag
gatctccatgtcaccgagacccttccgcagatggtagctctctcagaagcctacatgcaa
atatatgagcagcacgaatga
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