Brachypodium distachyon (stiff brome): 100842821
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Entry
100842821 CDS
T01717
Name
(RefSeq) class V chitinase isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00520
Amino sugar and nucleotide sugar metabolism
bdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
100842821
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
100842821
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
100842821
NCBI-ProteinID:
XP_014751108
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All DBs
Position
5:complement(9786688..9793802)
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AA seq
460 aa
AA seq
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MACSRTLLLCTVISLSLAASALARPPNNTTQPAAATAVRAGYYFAADAHLRPLASLEASL
YTHLYYFSVDPTLQLPRDPAQARLLSAFSGALKAQNPALVTLLSVATQAASAASAAAAAA
DPAFAAMAADRASRAAFARAAVALARGNGFDGLDVSWRFPASALEMAHFGLLLADLRAAA
AAAPGFLLTATVYFSNHVFGFGVDYPSEAVSRGLDWVNVMAFGLSPPAIANVTAFDAPLY
DAASHFSASYGVVSWLDAGVPAGKLVLGLPLYGRSWFLRNKANGGVGEPVVAAGPKQQRG
SNAAGAISYAEVQALAAAGAGRAPGPVMTSYDNVSVASYVAVGDVWVAFDGVAVVAEKLG
FAARRGLLGYFLWPVNYDDANLTVSRRASDVWVQSKVSSDFRNATAVRQRKAPLELPPAL
RSPAPASPPLPVPTSASFSWLSRKKLDTHLHFAFECRAAG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcagcaggacactcctgctctgcactgtaatctcactctccctcgccgcttca
gctctcgcgcgacctcctaataacaccacccaaccggctgcagcgacggcggtgcgagcc
gggtactacttcgccgccgacgcccacctccggcccctggcttccctcgaagcctccctc
tacacccacctctactacttctccgtggacccaacgctccagctcccccgtgacccggcc
caggcgcgcctcctctccgccttctccggggcgctcaaggcccagaacccggccctcgta
accctgctctccgtcgccacccaagctgcttccgcggcgtccgcggcagcagcagcagca
gaccccgcgttcgccgccatggccgcggaccgggcctcgcgggccgcgttcgcccgcgcc
gccgttgccctggcccgcgggaacggcttcgacgggctcgacgtctcctggcgcttcccc
gcgtcggccctggagatggcccacttcgggctcctcctcgccgacttgcgtgctgccgcg
gcagcggccccggggttcctgctcacggccaccgtctacttctccaaccacgtcttcggc
ttcggcgtggactacccgtcggaggccgtctccaggggcctcgactgggtcaacgtcatg
gctttcgggctcagcccgcccgccattgcgaacgtcacggccttcgacgcgccgctctac
gacgcggcctcgcacttctcggcgagctacggggtcgtgtcgtggctcgacgcgggcgtc
ccggcggggaagctcgtcctggggctgccgctctacggcaggtcgtggttcctgcggaac
aaggctaacggcggcgtcggggagcccgtcgtggccgcggggcccaagcagcagcgcggg
agcaacgccgcgggcgccatatcctacgccgaggtccaggcgctcgccgcagccggggcc
gggcgcgcgccggggccggtaatgacgagctatgataatgtctctgtggcgtcgtacgtg
gccgtgggcgacgtctgggtcgcctttgacggcgtggctgtcgtcgccgagaagctcggg
ttcgccgcgcggcgcggcctgctgggttacttcctctggccagtcaactacgacgacgcc
aacctcaccgtgtccagaagagcatcagatgtctgggtgcagagcaaagtttcgtcggat
ttcaggaacgccaccgccgtccggcagaggaaggccccacttgagctgccgccggctctc
cggtcgcctgcgccggcatcaccgccgttgcctgtgccgacttccgcgtccttctcgtgg
ctgtcccggaagaagcttgatacgcacctgcatttcgcattcgagtgcagggcagcgggg
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