| Entry |
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| Name |
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
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| KO |
| K10683 | BRCA1-associated RING domain protein 1 |
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| Organism |
bdi Brachypodium distachyon (stiff brome)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bdi00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100842826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bdi03019]
100842826
04121 Ubiquitin system [BR:bdi04121]
100842826
03036 Chromosome and associated proteins [BR:bdi03036]
100842826
03400 DNA repair and recombination proteins [BR:bdi03400]
100842826
Messenger RNA biogenesis [BR:bdi03019]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100842826
Ubiquitin system [BR:bdi04121]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100842826
Chromosome and associated proteins [BR:bdi03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100842826
DNA repair and recombination proteins [BR:bdi03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100842826
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:complement(19008596..19012877)
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| AA seq |
657 aa
MASTCTNKILNPLLLHLSKMQLEVTCPVCVKLMSEPMMLPCCHAACRTCATTQTMNENDY
SCAMCALAYRSEDLKPALHLEGIVNILRSLDCTVTNVGLMIKQGSQADTSGTPGSVNVNH
HNLVGSKLVHNESTGPDKVKVDDVGNKAKDQTVEPMVLVQKGPCGSKSSDGPVDLDCDSN
DLEGELITATSPQSVLKRVPNVTHDHTRKLKRQKSTGQSENFDTEQPTMSGAWKCVLCHS
SEISECTGPLLHYLLGELVGDDQASKSNVLHVHGECIVWAPRAYITDGTVKNLEAELYRA
STMICSVCGLKGAAVGCFVDSCRKSFHLPCAHRISGCRWDKGNFVMLCASHSSKRLPCEI
SESKNKIQVQRSPSKSKNKKIQVQRSPSKSKNKKIQVQRSPSKSKNKKIQVQRSPSETML
VENSPPIENNGLLEASRFLTSEWMICGSGLSRHGKEFLDQFGRQTGITVTNDWSPNVTHV
VANTNEDGASSRTLKILMAILTGKWVVNVNWLKACLKAREPVSEEPYEIRSDIYGSFDGP
RKGRLRAVNEEPSLFSGLTFYFVRNFDPTYKAQLADLIATAGGSILGKANLSCTSLILYN
TDPPQIKDQDKINLAIKKRKDEAEKLAAKIGCRSVPHGWLLDAIASCTVQFPISQCT |
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| NT seq |
1974 nt +upstreamnt +downstreamnt
atggcgagcacctgcaccaacaagatcctcaacccgctgctgctccacctgagcaagatg
caactggaggtcacctgccccgtctgcgtgaagttgatgagcgagcctatgatgctacca
tgttgccacgcagcctgcaggacatgtgccactacacagactatgaatgagaatgactac
agttgcgccatgtgcgcattagcctaccgttctgaagatttaaagcctgctttgcatctt
gagggaatagtgaacattcttaggagcctcgactgcactgtaactaatgttggcctcatg
attaaacaggggtctcaagcggacacttccggaactccaggatcagtgaacgtaaatcac
cacaacttggttggttcaaagttggtacataatgaatcaactggacctgataaagtgaag
gtcgacgatgtgggaaacaaagctaaggaccagactgttgagccaatggttcttgtacag
aagggaccttgtgggtcgaaatcttctgatggtcccgtggatcttgattgtgacagcaat
gaccttgaaggagagctgataacagccacatcacctcaaagtgtattgaaaagagttcca
aatgtaacacatgatcatactagaaaactgaagaggcaaaagtccacaggacagagtgaa
aacttcgatacagaacaaccaactatgtctggcgcttggaaatgtgtactttgccattct
tctgaaattagtgagtgcactggccctttgttgcattatttacttggagaactagtgggg
gatgatcaagcttcgaaatctaatgttctacatgtccatggggaatgcattgtatgggct
ccacgagcatacattactgatggtacggtaaaaaacttggaggctgagttgtaccgtgct
tcgacgatgatctgcagtgtttgtggattaaaaggcgcagcagttggctgctttgttgac
agctgccgcaagagctttcatctcccatgtgcccataggatctcaggctgccgatgggac
aaaggaaattttgtgatgctctgtgcttcccattcatcaaagaggcttccatgtgagata
tcagaatcaaaaaataagatccaggtgcaacggtcaccttcaaaatcaaaaaataagaag
atccaggtgcaacggtcaccttcaaaatcaaaaaataagaagatccaggtgcaacggtca
ccttcaaaatcaaaaaataagaagatccaggtgcaacggtcgccttctgaaacaatgctt
gttgagaactcacctcccatagaaaataatggacttttggaagcatcacgttttctgaca
agtgaatggatgatatgtggatctggcctctctcgtcatgggaaggaattcttagatcag
tttgggcgtcaaactggcatcacagtaactaatgactggagcccaaatgtgactcatgta
gttgctaatacgaatgaagatggagcaagttccaggacattaaagattctcatggccata
ctgactgggaaatgggttgtcaatgtgaattggctgaaggcttgcctgaaggctagagaa
ccagtctcagaagagccctatgaaatccgttctgatatttatggctcctttgatggccct
cgcaaaggccgactacgagcagtgaacgaggaaccaagcctattttcagggctgactttc
tacttcgttcgcaatttcgacccgacatacaaggctcagcttgcagacttgattgctaca
gcaggcgggtcgatcttgggcaaggctaatctctcttgtacatccttgattctttacaat
acggaccctccccaaataaaggaccaagacaaaattaatttggctatcaagaagagaaag
gatgaggctgaaaaattggcagcaaaaattggctgcagatctgttcctcatggatggctt
ttggatgctattgcatcttgcacagttcaatttcccatctcacagtgtacctag |
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