Brachypodium distachyon (stiff brome): 100842837
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Entry
100842837 CDS
T01717
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100842837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100842837
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100842837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100842837
NCBI-ProteinID:
XP_003565103
UniProt:
I1HD12
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All DBs
Position
2:complement(4644614..4648735)
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AA seq
321 aa
AA seq
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MSATRPDHRRHHPPFLRDLSSPVSSSYRLPPASLRRETQTSTPPPPPPLLSLDDLSRHSP
SPQHHTPPQVTMTPSPPPPRGGLFSPLRSNGSPAPSAWWSPSVDDKARDSSPADGVVHHQ
QSPTTVSGQQSQSQQQKVALITLPPPREVARPEMPRDSVLSTGRVDEEEWVTVFGFLPGD
TNMVLREFEKCGIVLRHVPGPRDANWMHILYQSHHDAQKALAKHGHQLSSVLIIGVKQVD
PWQRPYLKDNTDENYQGSVSIPFPSQPVVPSGFATRNALAPLPSNSMQNGSFNESSHGAS
GAIASPAKSVLSKVMDLMFGL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctacaaggcccgaccaccggcggcaccacccgccgttcctccgggacctctca
tccccggtatcatcttcctaccgcctacccccggcctccctgcgccgcgagacccagacc
tccacgccgccgccgcctcccccgctgctctccctcgatgacctctcgcgccactcccct
tccccgcagcaccacactcctccgcaggtaaccatgactccgtcgcctcctccccctcgt
ggcggcctcttctccccgctgcgctccaatggctcccccgccccctcggcgtggtggtcc
ccctcggtggatgacaaggctagggatagttccccggcggacggagtcgtgcatcaccag
cagtccccgacgacggtgtccgggcagcagtcgcagtcgcagcagcagaaggtggcgctg
atcacgctgccgccgcccagggaggttgcgcggccggagatgccgagggattcggtgctc
tccactggccgggtcgacgaagaggaatgggtcacggtttttggttttttgcctggcgat
acaaacatggtactaagggaatttgagaaatgtgggatagtcttgagacatgttcctggt
ccgagggatgcgaactggatgcatatcttgtatcagagccatcatgatgcacagaaagct
cttgctaaacatggtcatcagttaagcagtgttcttataattggggtgaagcaagtggat
ccatggcagcgaccttatctgaaggacaacaccgatgagaactaccagggcagcgtatca
attccatttccatcacagcctgtagtgcccagcgggttcgccaccaggaacgcgctagca
cctttgcctagcaattccatgcaaaatggcagcttcaatgagagcagccatggtgcttct
ggagccatcgcttcacctgcaaaatccgtgttgtccaaagttatggacttaatgtttggc
ctctaa
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