Brachypodium distachyon (stiff brome): 100842985
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Entry
100842985 CDS
T01717
Name
(RefSeq) serine/arginine-rich-splicing factor SR34 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100842985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100842985
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100842985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_3
QWRF
Motif
Other DBs
NCBI-GeneID:
100842985
NCBI-ProteinID:
XP_003557937
UniProt:
I1H5L5
LinkDB
All DBs
Position
1:complement(62215475..62220569)
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AA seq
289 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED
ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSSSFGGGGGGGGGGRRGVSRHTDYRVL
VTGLPSSASWQDLKDHMRRAGDVCFSEVYREGSGTTGIVDYTNYDDMKYAIKKLDDTEFK
NAFSKGYIRVKEYDAKRGRSYSRSRSPSRSHSKSRSPSKSPRGRSASRSRSRSLSSRSRS
ASKGRSPSRSPARSKSPIASPANGAVASPKKRSPSRSPSRSRSPDAKSE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgctggagcaggacgatctatgttggcaacctccccggcgacatccgggag
agggaggttgaggacctcttctacaagtatggacgtatcgttgatatcgacttgaaggtt
cctccaaggcctcctggctatgcttttgtcgagtttgaagatcctcgtgatgctgaagat
gcttgtgctggacgggatggctacaactttgatggaaaccgtctaagagtggaacctgct
catggtgggagaggtagtggtggcccctctcatgaccgttcaagcagctttggtggtggt
ggtggcggcggcggcggcggacgccgtggtgtgtccaggcacacggattaccgtgttctg
gttaccggcctgccttcttctgcatcctggcaagatttaaaggaccatatgcgaagggct
ggtgatgtttgtttctcagaagtgtatcgtgaaggctctggcaccaccgggattgttgat
tacacaaactatgatgatatgaaatatgctataaagaaattggatgacactgaatttaag
aatgccttttctaaaggttatataagggtgaaggaatatgatgctaaacgtgggcgctcc
tactcacgtagccgaagcccaagtcgtagccacagcaaaagcaggagcccaagcaaatct
cccaggggccgctcagcatctaggtccagatcaaggtctctttcttcccgttctcggtct
gcatcaaaagggcgttctccgtcaagatcaccagcaagatccaaatccccgattgcttct
ccggcaaatggtgcagtagcaagtcccaagaagcgcagcccaagcaggagcccatctcgt
tcacggtctcctgatgcaaaatctgaatag
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