Brachypodium distachyon (stiff brome): 100843009
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Entry
100843009 CDS
T01717
Name
(RefSeq) importin-5
KO
K20222
importin-5
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100843009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100843009
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100843009
Pre-60S particles
100843009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IPO5
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
TPR_IMB1
HEAT_GCN1
TOR1L1_N
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
TPR_DNAAF5
HEAT_MROH2B_C
MMS19_C
RIX1
Arm
Cnd1
HEAT_GCN1_C
Ltn1_1st
ARM_TBCD_2nd
HEAT_Maestro
VPS15-like_hel
TPR_TNPO3_IPO13_3rd
INTS7_N
Adaptin_N
Htt_N-HEAT_1
ARM_ARMC5
RasGEF
Phasin_2
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
100843009
NCBI-ProteinID:
XP_003560904
UniProt:
I1GPA6
LinkDB
All DBs
Position
1:complement(8634919..8645760)
Genome browser
AA seq
1113 aa
AA seq
DB search
MDPQGQAQAEADAAAVLGADPAALTALLEDLMSPANEARSRAERLFHSLRASHPDALALR
LAHVLLSPSHQSAPMAAVLLRRLISPGSQAFVYPALTPATQSSLRALLLSASSAPELSKS
ISKKLSDAVAELATFLLPSNSWPDLLTFLYKAIASPSSPPALQESALNTLARLATHLAAG
FPNLHALLLSALSHPSSTDVRVAGLNAAISVIQSLSSAANRDQFQDLLPAMMRALAESLN
CGNEGSAQEALEMMIELAGAEPRFLRRQLPDVVASMLQIAEAPGLEDGTRHLAVEFVVTL
AEARERAPGMMRRLPRYVGRLFAVVMTMLLDVQDEPAWYAAVTEEEDAGETGSFVFAQEC
LDRLAIAVGGNTILPVAAESLPSYLGAEEWKRRHAALVTIAQIAEGCAKVMIKNLDQVVG
MVLNSFQDPHPRVRWAAINAIGQLSTDLGPELQNQLHHVVLPALASAMDDSENPRVQAHA
ASAILNFSENCRPEILTPYLDVIVGKLLVLLQSKSQMVQEGALTALASAADSSQEHFQKY
YDGVMPYLKAILMNATDKSNRMLRAKSMECISLVGMAVGKQKFRDDAKQVMEVLMTLQGS
QMESDDPITSYMLQAWARLCKCLGQEFLPYMSVVMPPLLQSAQLKPDVSITSAEGEDGES
DDEGVETITLGDKRIGIRTSLLEEKATACSMLCCYADELKEGFFPWIDQVATTLVPLLKF
YFHDEVRKAAVSAMPEILRSAKLAVEKGQAQGRDSSYLKQLSDYIVPALVEAIHKEPETQ
ILTSMLESLNESIQISGTLLDEGQVRYIVGGVKEVITASTNRRSERTERAKAEDFDSEED
ELLREENEQEDEIFDQVGDCLGTLVKTFKTYFLPFFDELSAYLTPMLVKHKSSEERRVII
CIFDDVAEHCREAAVRYYDTYLPSLLEACTSENPDVRQAAVYGIGICAEFGGSAFRPHTG
EALSRLYNVIKHPNALDLDNAMAYDNSVSALGKICQFHRDSIDASQVIPAWLTCLPLKND
LIEAKIVHEQMCAMLEKSDRDLLGHNNQYLPKIVSIFAEILCAGKDLATEQTASRIINLL
RQLQTTLPPSVLASTWSSLQPQQQLALQSVLTS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcaagggcaggcgcaggcggaggctgatgcggcggcggtgctgggcgcggac
ccggcggcgctgacggcgctgctggaggacctcatgtccccggccaacgaggcgcggtcg
cgggcggagcggctgttccactcgctccgcgcctcccacccggacgcgctcgcgctccgc
ctagcccacgtgctgctctccccgtcgcaccaatccgcgcccatggccgccgtgctcctg
cgccgcctcatctccccgggctcccaggccttcgtctaccccgcgctcacccccgccacg
cagtcctcgctccgcgcgctcctcctctccgcctcctccgcccccgagctctccaagtcc
atctcgaagaagctctccgacgccgtcgccgagctcgccaccttcctgctgccgtccaac
tcgtggcccgatctcctcacctttctttacaaagccatcgcctccccgtcctcgcctccg
gcacttcaggagtcagcgctcaacaccttagcccggttggctacccacctagccgccggc
tttcccaacctccacgcgctccttctctccgcgctctcgcacccttcgtccactgatgtc
cgcgtcgctgggctcaacgccgccatcagcgtcatccaatccctctcctctgccgcaaac
cgcgaccagttccaggacctgctccctgcaatgatgcgcgccctagccgagtcgctcaac
tgtgggaacgagggctccgcgcaggaggcactggagatgatgattgagctcgcgggtgcg
gagccacgattcctccgtcgacagctgcccgatgtggtcgcctccatgctgcagatcgct
gaggcgcctggtttggaggatggcacacgccaccttgctgttgagtttgttgttacgctc
gccgaagcacgagagcgtgcacctgggatgatgaggaggctgccgcgctatgtgggcagg
ctctttgcggtggtcatgacgatgctgcttgatgtccaggatgaaccggcatggtatgct
gcagtgacagaggaggaggatgctggggaaacaggaagctttgtttttgcacaggagtgt
cttgaccggcttgcaattgctgttggcggaaatacgattttgcctgtggctgcagagtcg
ctcccgtcgtatttgggtgccgaagagtggaagagacggcacgcagcactggtgacaata
gcgcagattgcagagggctgtgctaaggtgatgattaagaatctggatcaggtagttggg
atggtgttgaattccttccaggatcctcatcctcgggtgaggtgggcagcaatcaatgca
atagggcagctttcgacggacctgggacctgagttgcaaaaccagttgcaccatgtcgta
ctacctgcattggcttcagccatggatgattcagagaacccacgcgtacaggcacatgca
gcctctgcaattttaaacttcagcgaaaattgcagacctgaaattttaacaccatacttg
gacgtgatagtcgggaaacttctagtgttgcttcagtctaagagccagatggtgcaagaa
ggtgctttaactgctttagcatcagccgcagattcttctcaggaacactttcaaaaatat
tatgatggagtcatgccatacctcaaggctatactcatgaatgcaactgataaatcaaac
agaatgttgcgtgccaaatccatggaatgcattagtttagttggtatggctgttggtaaa
caaaaatttagggatgatgctaagcaggtgatggaagttttgatgacacttcaaggatct
cagatggagtctgatgaccctataacaagttacatgctacaagcatgggcaagactttgt
aaatgccttggtcaggagttcctaccgtacatgagtgtcgttatgccccctctgctacag
tctgctcagcttaaaccagatgtgagcatcacttctgctgaaggcgaggatggtgaatct
gatgacgagggtgtcgagactattaccctgggggataaaagaattggcatccggaccagt
cttctggaggagaaagcaacagcatgtagtatgctgtgttgctatgctgatgaactcaag
gaaggttttttcccatggattgatcaggttgcaactacactggtacctctcctcaaattc
tatttccatgatgaagttaggaaggcagctgtttcagcgatgcctgagattctacgttca
gcaaagttggcagtagaaaagggccaagcccaaggccgggatagttcttatcttaagcaa
ctatctgattacatagttccagctcttgtggaggctatacataaagaacctgagacgcaa
attctcactagcatgctggagtcactgaatgagtcgatacagatatcaggaacacttctt
gatgaaggccaagttcgatatatagtaggtggagtcaaagaagtaataacagcaagcact
aataggaggagtgaacgaacagagagggcaaaagctgaagactttgattcagaagaggat
gagctactaagggaggaaaatgaacaagaggatgaaatctttgatcaagttggtgattgt
ttgggtactctggtcaaaaccttcaagacttatttccttccattctttgatgaactctcc
gcctatttgacacctatgttggtgaagcataagtcatcagaagaaagaagggttatcata
tgcatttttgatgatgttgcagaacactgtcgagaagcagcggttaggtactatgacaca
tatcttccttctctgttagaagcctgcacaagtgaaaacccagatgttagacaggctgca
gtttatggcattggcatttgtgctgagtttggtggttccgcatttaggcctcacactggg
gaggcactgtccagattatacaatgtaatcaaacatcctaatgcattggatttggataat
gcaatggcatatgacaattctgtttctgcccttggaaaaatatgtcagtttcatcgtgat
agcattgatgcatctcaggtcattcctgcttggttaacttgtctgccattaaaaaatgac
ttaattgaggccaagattgtccatgaacagatgtgtgcaatgcttgagaagtctgatagg
gaccttttgggtcataacaaccaatatctaccaaagattgtatctatttttgcagagata
ttatgtgcgggtaaggatctggcaacagaacaaactgctagcaggataattaatctgcta
agacagcttcaaaccactttgcctccctcagtactggcctcgacatggtcttctcttcag
ccacagcaacagcttgcgctacaatctgtattaacatcatag
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