Brachypodium distachyon (stiff brome): 100843013
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Entry
100843013 CDS
T01717
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00730
Thiamine metabolism
bdi01100
Metabolic pathways
bdi01240
Biosynthesis of cofactors
Module
bdi_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
100843013
Enzymes [BR:
bdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
100843013
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Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
100843013
NCBI-ProteinID:
XP_003561310
UniProt:
I1GPL5
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Position
1:complement(9452015..9459415)
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AA seq
643 aa
AA seq
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MAALQPSFSSTMAMNNSCSTMKFPKTALLPCFGGISRPQDVQDRNAGFNSSRPKAVSLAD
QSIQEPAKPRQKKQTVDPTAPEFLPLPSFEECFPRSTKECSEIVHEESGHVLKVPFRRVH
LTGDNEHFDTYDTSGPQNISPSLGLPKIRKEWIDRREKLASPRYTQMYYAKQGIITEEMV
YCAKRENLTPEFVRSEVARGRAIIPSNKRHLELEPMIVGRNFLVKVNANIGNSAVVSSIE
EEVHKLQWATMWGADTVMDLSTGRHIHETREWIIRNSSVPIGTVPIYQALEKVNGIAEDL
SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLTYHKEN
FAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDSAQFAELLTQGELTRRAWEKDVQV
MNEGPGHIPMHKIPENMEKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGT
ALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKRHPYAQAWDDALSKARFEFRWL
DQFALSLDPVTAMSFHDETLPSDGAKVAHFCSMCGPKFCSMKITEDIRKYADEHGYGTVE
EAVRQGMSDMSAEFLAARKTISGEQHGEAGGEIYVPESYVATK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctgcaaccctcattctcgtcaaccatggctatgaataatagctgcagcact
atgaagttccccaaaactgcacttttgccttgttttggtggtatttcacgtcctcaagat
gtgcaggacaggaatgctggcttcaattcttcaaggcctaaggcagtttcactggctgat
cagtcaatacaagagccagcaaaacccaggcaaaagaaacaaacagttgatcctactgct
ccagaattcctgccactcccatcatttgaagaatgctttcctcggagcaccaaagaatgc
agtgaaattgttcatgaggaatcaggtcatgtcctcaaggttccattccggagagtccat
ttgactggagacaatgagcattttgatacatatgacaccagtggtccacaaaacataagt
ccaagtcttggactcccaaagataagaaaagagtggattgaccggagggagaaattagct
agtcctcgatacacgcaaatgtactatgctaagcagggaataataacagaggagatggtg
tactgtgccaaacgtgagaatctcactcctgaatttgtccggtcagaggttgcccgtgga
cgggccattattccttccaacaagaggcacctggaattggagcccatgattgttggaaga
aatttccttgtaaaggtaaatgcaaacattggaaactcagctgttgtgagctccattgag
gaggaagtccacaagctccagtgggccacaatgtggggagcagatactgtcatggacctt
tcaacagggcgccatatacatgagacccgggaatggattattcgtaattcttcagttcct
attggaactgttcctatttaccaagcacttgagaaagttaatggtattgctgaagatctg
agctgggaagtctttagagacactttaattgaacaagctgagcaaggtgttgattatttc
accatccatgctggtgtgttgcttcgttatatccctcttacagcaaagagaatgactggc
atagtttcacgtggtggatctatccatgcaaaatggtgcttaacctaccacaaggagaac
tttgcttatgagcattgggatgacattcttgacatatgcaatcagtatgatgtagcatta
tcaattggcgatggtttgaggcctggttctatttatgatgcaaatgatagtgctcagttt
gcagaactgctgactcaaggggaactaacacgccgagcatgggagaaagatgtgcaggtg
atgaatgaaggtccagggcatattccgatgcataaaattcctgagaacatggagaaacag
ctggagtggtgcaatgaagcacctttttatacattgggtccattgacaactgatatcgca
cctggttatgatcacatcacctcagccattggcgctgccaatattggggctcttggaact
gcacttctttgttatgtaacaccaaaggagcaccttgggttgcctaatcgtgatgatgtt
aagacaggtgtgatatcctacaaaatagctgctcatgctgctgacttggcaaagcgtcat
ccttatgcacaagcatgggatgatgcactaagcaaggcgaggtttgagtttagatggttg
gaccaatttgctttatcgcttgatccagtaactgctatgtctttccatgatgaaacatta
ccgtctgatggcgccaaagtagcacatttctgttcaatgtgtggtcccaagttctgttcg
atgaaaatcacagaagatattaggaagtatgctgatgaacatggttacgggacagtggag
gaagctgtgagacaaggaatgagtgacatgagtgctgaatttttggctgcaaggaaaaca
attagtggtgaacaacatggtgaagctggaggggaaatctatgttccagaaagctatgta
gctacaaaataa
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