Brachypodium distachyon (stiff brome): 100843152 Help Entry 100843152         CDS       T01717                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism bdi  Brachypodium distachyon (stiff brome) Pathway bdi03013   Nucleocytoplasmic transport bdi03040   Spliceosome Brite KEGG Orthology (KO) [BR:bdi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100843152   09122 Translation    03013 Nucleocytoplasmic transport     100843152  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bdi03019]     100843152    03041 Spliceosome [BR:bdi03041]     100843152 Messenger RNA biogenesis [BR:bdi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      100843152 Spliceosome [BR:bdi03041]  Complex C   Other components    EJC/TREX     100843152  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     100843152 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  100843152 NCBI-ProteinID:  XP_010232734 UniProt:  A0A0Q3RDC7 LinkDB All DBs Position 2 Genome browser AA seq 1783 aa AA seqDB search MSPPLQAPDYKYVTEECLREWKSQSAAGFRLPDPLPMARFLYELCWAIVLGDLPPQKCRV ALDSVVFVEEAWHEESGSVLADIVAHLGQDITISGEYRNRLVKMTKSFVESSLIVPRLLQ ERCEEEFLWEVEQSKSKGQDLKAKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCQVG SDLACQNASSATISIIKSLIGHFDLDPNRVFDIVLECFELYPDNSTFYQLIPLFPKSHAA QILGFKFQYYQQLDVNSPVPSGLFRIAALLVKSGLIDLDNLYAHLLPNDDEAFEHFGSFV SRRIDEATKIGKINLAATGKDLMDDEKQEITIDLYTALEMENDIIEERAPEIEKNQKLGL LLGFLSVHDWDHAQILFERLAQLNPVEHIEICDGLFRVIEKTISSAYTIYCQTHHKIPRN IDTHMIEASSVSSPSYLVDLPKEFFQMLAACGPYLHRDTQLFQKVCRVLKVYHVSSKDSA RTAGVMSTESRVEEALGSCLLPSLQLIPANPAVDMEIWGVLSLLPYEARYRLYGEWEKDT EQNPIVLAARQTAKLDTRRLLKRLAKENLKQLGRMVAKLAHANPMTVLRTIVTQVEAYRD MINPVVDAFKYLTQLEYDILQYIVIERLAQGGREKVKDDGLNLSDWLQCLASFWGHLCKK HLSMELKCLFQYIVNQLKKGLGTELVVLEELIQQMANVQYTENMTDEQVDAMAGSETLRL QSSLFGSTRNYKVLNKSTNKLRDSLLPKDEPKLAIPLLLLIAQHRSNIIINADATYIKMV SEQFDRCHGILLQYAEFLSSAVTPVTYVQLIPPLEDLVYKYHIEPDVAFLIYRPVMRLFK SANGGDTCWPLDDNEEGESVSCDDMILYGDSSQKLIMWSDLLNTIRTILPAKAWNALSPE LYATFWGLTLYDLHFPKDRYDAEIKKLHDNLKQLEDNSDNSSIAISRRKKDKERIQDLLD KLNNESEKHQQHVTSVFQRLAREKDKWLSSSPDALKINMEFLQRCIYPRCVLSMQDAVYC ATFVQMMHSLGTPFFNTVNHIDVFICKTLQPMICCCTEYEAGRLGRFLHETLKMAYHWKS DESVYERECGNKPGFAVYFRFPNSQRVSYTQFVKVHWKWSGRITKVLNQCMESKEYMEIR NALIVLTKITSIFPVIRKSGVNIEKRVAKLKGDEREDLKVLATGVAAALAARKSSWLSEE EFGMGHLDTKPVPAKPIPGNQSSDPSTAKDRSVRAKSTEVRHERTENAMKSDAQHKKNPL PANGSDSQIPSSSAQGKVSGVARGADEPPKLLSDEGVKVLKPTTEFETRVPQKRATHNAA KVSKHDAVKEDAKSGKSTSRGLNQQASAVPIDREVSSQAADGVLDTNPTNSLVGTNGNVH PAPRKVSAPSQRSTVLAAHSGGTANPTGEGESTDLIDSTVKQQKRSVPAEEQERISKRRK GEIESRDGELTEHHTDKEKKLDSRSADRFRSADHEKGASEEQNIIRTDKLKEKFDDKHDR DPREKAERIERRRGEDVVERSMDRASDRRERSIDRMQDRVTDRAPEKGREDRNKEDRNKA KHAEPSVDRAHSSDERFRGQSLPPPPPLPASFVPQSVGSNRRDEDSDRRGGSTRHTQRLS PRRDEKERWHLEENASSLQDDGKHRREEDLRDRKREDRDVSSSKVDDRDRDKVSTMKEDS DPNGASKRRKIKREQSALEAGEYAPSAPQPPSLGAGGSQLEIRERERKGVISQHRPSHAD DLPRTHAKDSTSKTSRREADQIHEREWEEEKRPRTEPKRKHRK NT seq 5352 nt NT seq  +upstreamnt  +downstreamnt atgtcgcctcctctccaggcgccggactacaagtacgtcacggaggagtgcctccgcgaa tggaagagccagtccgccgccggcttccgcctccccgatccgctccccatggcgcgcttc ctctacgagctgtgctgggcgattgtgctgggcgacctgccgccgcagaagtgccgggtg gcgctggattcggtggtgttcgtggaggaggcatggcacgaggagtccggttctgtgctc gcggacatcgtcgctcacctagggcaggatattacaatttctggcgagtatcgcaaccgt cttgtcaaaatgactaagtcatttgtggagtcttcgttgattgtgcctaggcttcttcaa gagcgatgtgaagaagagttcctatgggaggttgagcagagtaagtcaaagggccaggat ttaaaagccaaagaggtcagagtcaacacgcggcttctttatcagcaaactaaattcaac cttttaagagaggaaagcgagggctacgccaagttggtcaccctactttgtcaagtcggt tcagatttggcttgccaaaatgcttcttcagctactatcagcattataaagtcattaatt gggcactttgacctggacccgaatcgcgtatttgacatagtgttggaatgttttgaactc tatccagataacagtaccttttatcagcttatacctctttttcctaagtcccatgctgct caaattttagggttcaaattccaatactatcaacaattggatgtcaacagccctgttcca tctggtcttttccgaatagcagccttgttggtgaaatctggtcttattgaccttgataat ctctacgcccatttacttccaaatgatgatgaggcatttgagcattttgggtcctttgtt tcaaggagaattgatgaggctactaaaatcggcaaaataaatcttgctgctactgggaaa gaccttatggatgatgagaagcaagaaataactattgatttgtacacagcattggagatg gagaatgatataattgaggagcgagcccctgagatagaaaagaaccagaagcttggactt cttcttggtttcctctcagttcatgattgggatcacgcacagatactctttgagcgtctc gcacagctaaatcctgtcgagcacattgaaatttgtgatggattatttagagttattgaa aagactatttcatcagcctacactatatattgtcaaacacatcataaaatccctcgtaac atcgacactcacatgatagaagcatcatccgtctcttcaccaagttatttggttgatctg ccgaaagagtttttccaaatgcttgctgcttgtggaccgtaccttcatcgtgacacacaa ttatttcagaaggtttgcagagtgctaaaagtgtaccacgtctcatcaaaagactcagca cgtacagctggtgtaatgtcaacagaatctcgtgtcgaggaagcacttgggtcatgcttg cttccttcattgcagcttatacctgccaatcctgctgttgatatggagatatggggagtt ctttcccttcttccttacgaggcacgctatcggttgtatggtgagtgggagaaggacact gaacaaaatccaattgtccttgctgcaaggcaaacagcaaagctcgacaccagaaggctc ttaaaaaggctggccaaggaaaatcttaagcagcttggccgcatggtggctaaactcgct catgcaaatccaatgaccgtgcttcggacaattgtcacacaggttgaagcatacagggac atgataaatcctgttgtggatgcttttaaatacttgacccagctggagtatgatatcttg caatatattgtaattgaacggttggctcaaggtggtcgtgagaaagtaaaagatgacggt cttaatctgtcagactggcttcagtgtcttgcatcattttggggacacctctgcaagaag catctttccatggagctaaaatgccttttccaatacattgttaatcaactgaagaaagga ttgggcactgagcttgttgtactggaggaactgattcagcaaatggcaaatgtacagtat actgagaacatgacagatgaacaggttgatgctatggcagggagtgaaacattgcggctt caatcttcactatttggatcaacaaggaattataaggtcttgaataagtctacgaataag ttgcgggattctttgcttccgaaagatgaaccaaaacttgctattcctctattactgctt attgctcagcatcgatctaacattataataaatgcagatgccacatatatcaaaatggtc agcgagcagtttgatagatgtcatggaatactgcttcagtatgctgagtttctttcaagt gctgtaactccagtgacctatgttcaactaatacctccgctggaagatttggtttataaa tatcatattgagccagatgttgctttccttatataccgcccggtgatgaggcttttcaaa agcgcaaatggtggcgacacctgttggcctctggatgacaatgaagaaggggagtctgtg tcttgtgatgatatgatcttgtatggtgattcatctcagaagttaatcatgtggtcagat cttcttaacacaatccggacaattttgccagcaaaagcctggaatgctctttcacctgaa ttatacgctactttctgggggttaacactatatgaccttcattttccaaaagatcgttat gatgcagaaatcaagaagctgcatgacaatctcaaacaactggaagataactcagataat tctagcatagcaatatcacgacgtaagaaagataaggagagaatccaagatttacttgac aaattgaacaatgaatctgagaagcaccaacaacatgtcacatcagtgttccaaaggcta gcccgtgaaaaggacaagtggctgagttctagtccagacgcactgaagattaacatggaa tttctccagcgttgcatatacccacgctgtgttctcagcatgcaggatgctgtttattgt gctacgtttgtccagatgatgcattcacttgggactccatttttcaacacagtgaatcac attgatgttttcatctgcaagacactgcagccaatgatctgttgttgtacagaatatgag gctggcaggcttggaaggtttcttcacgagacactgaagatggcctaccattggaagagt gatgaatcagtatatgagcgtgaatgtggaaataagccgggatttgctgtgtacttcaga tttccaaatagtcaacgtgtgtcttatactcagtttgttaaagttcattggaaatggagt ggaagaattacgaaggtgcttaaccaatgtatggaatcaaaagaatacatggaaattcga aatgcccttattgtgctcacaaagattactagtatttttcccgtgattcgaaaaagcggt gtcaatatcgagaaaagggttgcgaagctaaagggagatgagagggaagatctgaaagta ctggccactggtgtagctgctgctttggcagctcggaagagttcatggctatctgaagaa gagtttggtatgggtcaccttgatacaaagccagtgcctgcgaaacctattcctggaaat cagtcgtcagatccctcgacagcaaaagatcggagtgttcgtgcaaaatctacagaggtc aggcatgagagaacagaaaatgccatgaagtctgatgctcaacacaagaagaatcccttg cctgcaaatggatctgatagtcaaataccatcttcctctgcacaaggaaaagtttcaggg gttgcacgtggtgcagatgaacctccaaaacttctctctgacgagggagttaaggttttg aagcctactacagaatttgagacgagagtaccacaaaaacgtgccacacacaatgctgca aaggtatctaagcatgatgcggtgaaggaagatgcaaaatctgggaaatctactagcagg ggtcttaatcaacaagcctctgctgttcctatcgatagagaagtatcgtctcaggcagct gatggtgtgctggatactaatcctactaattcgttggttggcaccaatggtaacgtacat ccggcgccgcgaaaggtatcggcaccttctcaaagatcaacggtgttggctgcacatagt ggtggaacagctaatcccaccggtgaaggtgaatctactgacttgattgactctaccgtg aaacagcaaaaaagatctgttccagctgaagaacaagagagaataagtaaacggaggaaa ggagagattgaaagccgtgatggtgagttgacagaacaccacacagacaaagaaaaaaaa ttggattcacgatcagcagatagatttcgctccgcggatcatgagaagggtgctagtgag gaacagaacataattaggacagacaaattaaaagaaaagtttgatgataaacatgacaga gatcccagagaaaaagcagagcgaattgagaggcgccgtggggaagacgtggttgagaga tcaatggacagagcatcggataggagagagcgttctattgacaggatgcaagacagagtg acagacagggctcctgaaaaaggaagagaagacaggaataaggaggatagaaacaaagct aagcatgctgaaccctccgtagatcgagcacatagttctgatgaacgattccgagggcaa agcttaccaccgcctccacctcttccagcaagttttgtaccccaatcagtcggttctaac cgaagagatgaagatagtgaccgaagaggtggcagcaccaggcatactcaacggttgtct cccagacgcgatgagaaagaaaggtggcatttggaggagaatgcttcgtcgttgcaggat gatgggaaacacaggagagaggaagatctccgagatagaaagcgtgaagatagggatgtt tcatcaagcaaggtagatgacagggatagggacaaagttagtactatgaaggaagacagt gaccctaacggtgcttccaaacggcgaaagattaagagagagcagtctgctttagaagct ggggaatatgcaccttctgctccacagcctcccagccttggagctggtggctcgcaactt gaaatccgagagagagaaagaaagggtgttatctcacagcatcggccatcacatgctgat gaccttcctaggacacacgcaaaggattcaacaagcaagacaagtcgtagagaggctgac caaatccacgagagagaatgggaagaggaaaagaggcctagaactgaaccaaaaagaaag catcggaagtag

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