KEGG   Brachypodium distachyon (stiff brome): 100843177
Entry
100843177         CDS       T01717                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03020  RNA polymerase
bdi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100843177
  09124 Replication and repair
   03420 Nucleotide excision repair
    100843177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdi03021]
    100843177
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100843177
Transcription machinery [BR:bdi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100843177
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100843177
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 100843177
NCBI-ProteinID: XP_003573316
UniProt: I1HWD6
LinkDB
Position
3:979777..980671
AA seq 141 aa
MSGEEEENAAELKIGEEFLKAKSLMNCEVAIILEHRYEQLQQMSDGGGDPSSQMSQVFEK
SLGYVKRFSRYKNPDAVRQVRETLSRYGLHEFELCTLGNLCPDTADEAKALVPSLVPGGR
FDVDERIDKMLNDLSLIKKFE
NT seq 426 nt   +upstreamnt  +downstreamnt
atgtccggcgaggaggaggagaacgccgcggagctcaagatcggcgaagagttcctgaag
gcgaagagcctgatgaactgcgaggtggcgatcatcctggagcacaggtacgagcagctg
cagcagatgtcggacggcgggggggacccgtcgtcgcagatgtcgcaggtgttcgagaag
tcgctgggctacgtgaagcgcttcagccgctacaagaaccccgacgccgtgcgccaggtc
cgcgagacgctcagccgctacggcctccacgagttcgagctctgcaccctcggcaacctc
tgccccgacaccgccgacgaggccaaggcgctcgtcccctccctcgtccccggcggcagg
ttcgacgtcgacgaacgcatcgacaagatgctcaacgacctctccctcatcaagaagttc
gagtag

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