Brachypodium distachyon (stiff brome): 100843375
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Entry
100843375 CDS
T01717
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100843375
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bdi04812
]
100843375
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100843375
Cytoskeleton proteins [BR:
bdi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
100843375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT
CEP104-like_TOG
HEAT_EZ
HEAT_EF3_N
HEAT_2
Adaptin_N
HEAT_DAAF5
MMS19_C
TOR1L1_N
INTS1_R4
Dopey_N
Motif
Other DBs
NCBI-GeneID:
100843375
NCBI-ProteinID:
XP_010235963
UniProt:
A0A0Q3MAJ5
LinkDB
All DBs
Position
3:55303649..55311821
Genome browser
AA seq
1229 aa
AA seq
DB search
MASSAAVAQLLPPGPGAESAAAAALANVLRPGGGDAEAARAALDALCAAGGDAVRRHADD
LTPLVVGRLGDGDAAVREAARRFLMLLMEMKEMNARVENIQTASSISDVQHSNCMAIEVE
SSDTTQVRRSPKHKISTRDMSHLAGEGDITRKSVEPIKVFSEKDLTKEIEKIMSTLQADN
EWSIRITAMQRVEGIVLGGAADYSAFPMLIKQLVTPLITQLLDRRSSVVKQACHLLIFLS
KELLRDFEPCAELLIPALLKNVVITVSVIAESADNCIKEMLRNCKVARILPRIIEFAKND
RSAILRVRCCEYAVLMLEYWVDTPEMQRSANLYEDLIKCCISDATSEVRSGARACYRIFS
RIWPERSHQLFSSFEPSRQKMINDDDVEAHQKHLSPVVKLRHPQSNPCIPTAMDKVVKVD
LRTSFPSEDQQSALVKISLQLDDMTSKSSAEDIKDGTLATGHPFEERRELEKERVPDEYP
DKCDSDNNAGISSISCDVPSATPFESAPEISLSESTIVTIVQDKAECRPNTEQQKSSLQV
GSKDSEKLLKQSFAKTSSDGSSRVQPGTQQVEKHCVSSSTPRKAVVHKEPQNNYTPNFRR
PLLSKQMTNLFYASTRGDLDSKQLIWGEMVNSMDVPSSLTEALSLGVNPRSDWMMRVYAF
DFLRQSLLERGPKGIQEVAQNFEKVMRFVSRYLNDPHHKVAHAALLSLAEIMPVFKKPFE
HYLDKMLPHIFSRLNDPKESIKQKCLAILKLGGEIFSIDSLLPALLRSLDEQKSAKSKLA
VLEFANASFVKCTVNSDSYSSSSFLKPWLGKLTLLFKDRNNKLKEAAVIGLSSIYSHYDP
ASMLSFLVTLSMEEQKQLRWAMKQLIPMIESELEEFLQQKRHKQNVPSFDRFASTDQRHA
KSFVEKQNKPQQHDACQSNYYGADDIFSSAFQYLPNIPLEVYEHHTGKVESVSGNESYGQ
KAEIMDKGSSTTRLSSGFPGRSDYSVLSENTVESRSKDVWINDFQSHGPGISQTYHQDTP
SQMDKGPETGGHSVLIKNLHQMSSSLLEMLDNPDESTREFALSLLVEILEKQGKAMENCI
EALVAKLLHATKGAALKVVNQAHICLTTVVTKFDPVRCLRAIASQLVCHDEKILVVSINS
LSKLVTRLSQDDLMTQLSTFLPALLDASENHSPYVRKAVLLCLADTYLKLGPVLLPHLDR
LDGAQLRLVVTSAASRLPSRSKFVAAVDV
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgccgcggtggcgcagctgctgccgcccgggccaggcgcggagagcgcg
gcggccgccgccctcgcgaacgtcctccgccccggcggcggcgacgccgaggccgcgcgc
gcggcgctcgacgcgctgtgcgccgccggaggggacgcggtgcggcgccacgcggacgac
ctcacgccgctggtcgtcggccggctcggggacggcgacgcggccgtgcgggaggcggcc
aggaggttcctcatgctgctcatggagatgaaggagatgaatgcaagagttgaaaatata
caaactgcttctagcatatcagatgtccagcacagtaattgtatggctatagaagttgaa
tcttctgataccactcaagtaaggagaagtcccaaacataagataagcacaagagatatg
tcacatctagcaggagaaggagatattacaagaaaatcagttgaacctataaaggtattc
tctgagaaggacctgacaaaggaaatagaaaaaataatgtctactttacaagcagataat
gagtggtcaatccggataactgcaatgcaaagagtggaaggcatagttcttggaggtgct
gcagactattcagcattccccatgcttataaagcaactcgtgacccctcttataactcag
cttctggataggagatctagtgttgtaaaacaggcatgccatttgctaattttcctgtca
aaagagttattacgtgactttgaaccatgtgctgaattgcttattccggcccttcttaag
aatgtcgtgatcactgtttctgtaattgccgaatcggctgataactgtataaaagagatg
ctccggaactgcaaagtagctcgcattctgccaagaattattgaattcgcaaagaatgac
agaagtgcaattcttcgtgtcaggtgctgtgagtatgcagtattgatgcttgagtactgg
gttgatactccagaaatgcagagatcagctaatctttatgaagacctgataaagtgttgc
atatcagatgcaactagtgaggttcgatcaggtgctagagcatgctacaggatattctcc
aggatttggcctgaacgttcccaccaactgttctcatcatttgaaccatctaggcaaaaa
atgataaatgatgatgatgttgaggcacatcaaaagcacctttccccggtagttaagcta
aggcaccctcaatctaatccttgtatcccaactgcaatggacaaagttgtcaaggttgat
ttgaggacatcatttccttctgaagaccagcaatcagcgctggtgaaaatatcccttcaa
cttgatgatatgacctccaaaagttcagctgaagacattaaagatgggactttagctact
ggacatccatttgaagaaaggagagaactagaaaaagaaagagttccagatgaataccct
gataaatgtgattcagataataatgcaggtatcagttcaatatcttgtgatgtgccttct
gccactccatttgaatcagctccagaaatttcattgtctgaatctacaattgtaacaatt
gttcaagacaaggctgagtgcaggccaaatactgagcagcagaaaagttcccttcaagtt
ggatcgaaagattcagaaaaattgttaaagcaaagctttgctaaaacaagctccgatgga
agctcgcgtgtacaaccagggactcagcaggtggagaagcactgtgttagcagtagcact
cctcgtaaagctgtagttcataaggagccacagaacaactacactcctaacttccggaga
cctctcttgagtaagcagatgacaaatttgttttatgccagtacaagaggtgatttagat
agtaaacaactcatttggggtgaaatggtcaacagcatggacgttccctcatctctcaca
gaggcactttctttaggcgttaacccaaggtcagattggatgatgagggtatatgcattc
gatttcttacgacagtctttgctagagaggggaccaaaaggcattcaggaagttgcacag
aattttgagaaggtcatgaggtttgttagtcggtacttgaatgatccacatcataaagtg
gcacatgctgccctcttgtcacttgctgaaatcatgccagttttcaagaagccttttgaa
cattatctggacaagatgctgccccatattttctctcgattaaatgatccaaaggaatca
ataaagcagaaatgcttagcaattttgaaacttggaggtgagattttctccattgattct
ctcttacctgctctacttcgttcactagatgagcagaaatctgccaagtcaaaactggct
gttcttgagtttgcaaatgcttcctttgtaaaatgcacagtcaattctgacagctattct
agcagcagttttcttaagccatggcttgggaagctaactcttttgtttaaggatagaaac
aacaagttaaaagaggctgcagtgattggtttatcttcaatctattctcattatgaccct
gcatccatgttgagctttctagttaccttgtcaatggaagaacaaaagcaacttagatgg
gcaatgaagcagttaatccctatgattgagagtgagttggaagagttcttgcagcaaaag
agacataaacaaaatgtgccatcttttgatcgctttgcttctactgatcaacgtcatgct
aaaagttttgttgaaaagcaaaataaaccccagcagcatgacgcctgccaatctaattat
tatggagctgacgatatatttagctctgcattccagtatctcccaaatattcctttagaa
gtctatgagcaccatactgggaaggttgaatctgtatctggtaatgaatcttatggccaa
aaagctgaaataatggacaaagggtctagtactacaaggctaagcagtggtttccccggg
agatctgattatagcgtgctatcagagaacacagttgagagtcgaagcaaggatgtctgg
ataaatgactttcagagtcacggtccaggcatttcccagacgtatcatcaggacacacca
agtcaaatggacaaaggtcctgagacgggcggccattcggtgttgatcaagaatttacat
cagatgtcctcttcccttcttgagatgcttgataatccagatgaatccaccagagagttt
gcactttctttgttggttgaaattctcgaaaagcaaggaaaggcaatggagaattgtatc
gaggctcttgtagctaagttgctgcatgcaaccaaaggtgctgccttgaaggttgtaaat
caggcccatatctgtttgacaactgtggttactaaatttgacccagtgagatgcctcagg
gcaattgcttctcagttggtctgccatgatgagaaaattcttgttgtcagcattaatagt
ttgagcaagctcgtgactcgattgtcacaggatgacctcatgactcagttgtcaacattt
cttcccgcgctcttggatgcctccgaaaaccatagtccatatgttcgcaaggccgttttg
ctgtgcctggcggacacgtacctgaagctgggcccggtcttgctgccgcacctggaccgg
ctggacggcgcgcagctgcggctcgtcgtcacctcggcggccagcaggctgccgtcccgg
agcaagttcgtcgcggcggtcgacgtttga
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